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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 09, 2024. (Total: 6442 publications)
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Records 1-30 (of 102 Records)
Query Trace: Garcia A[original query]
Changes to virus taxonomy and the ICTV statutes ratified by the International Committee on Taxonomy of Viruses (2024)
Simmonds P , Adriaenssens EM , Lefkowitz EJ , Oksanen HM , Siddell SG , Zerbini FM , Alfenas-Zerbini P , Aylward FO , Dempsey DM , Dutilh BE , Freitas-Astúa J , García ML , Hendrickson RC , Hughes HR , Junglen S , Krupovic M , Kuhn JH , Lambert AJ , Łobocka M , Mushegian AR , Penzes J , Muñoz AR , Robertson DL , Roux S , Rubino L , Sabanadzovic S , Smith DB , Suzuki N , Turner D , Van Doorslaer K , Vandamme AM , Varsani A .
Arch Virol 2024 169 (11) 236
Regulatory elements in SEM1-DLX5-DLX6 (7q21.3) locus contribute to genetic control of coronal nonsyndromic craniosynostosis and bone density-related traits
Nicoletti P , Zafer S , Matok L , Irron I , Patrick M , Haklai R , Evangelista JE , Marino GB , Ma'ayan A , Sewda A , Holmes G , Britton SR , Lee WJ , Wu M , Ru Y , Arnaud E , Botto L , Brody LC , Byren JC , Caggana M , Carmichael SL , Cilliers D , Conway K , Crawford K , Cuellar A , Di Rocco F , Engel M , Fearon J , Feldkamp ML , Finnell R , Fisher S , Freudlsperger C , Garcia-Fructuoso G , Hagge R , Heuzé Y , Harshbarger RJ , Hobbs C , Howley M , Jenkins MM , Johnson D , Justice CM , Kane A , Kay D , Gosain AK , Langlois P , Legal-Mallet L , Lin AE , Mills JL , Morton JEV , Noons P , Olshan A , Persing J , Phipps JM , Redett R , Reefhuis J , Rizk E , Samson TD , Shaw GM , Sicko R , Smith N , Staffenberg D , Stoler J , Sweeney E , Taub PJ , Timberlake AT , Topczewska J , Wall SA , Wilson AF , Wilson LC , Boyadjiev SA , Wilkie AOM , Richtsmeier JT , Jabs EW , Romitti PA , Karasik D , Birnbaum RY , Peter I .
Genet Med Open 2024 2
Widespread geographic distribution of Aedes aegypti (Diptera: Culicidae) kdr variants in Panama
García J , Chong M , Rojas AL , McMillan WO , Bennett KL , Lenhart AE , Chaves LF , Loaiza JR .
J Med Entomol 2024 type
Early biological markers of post-acute sequelae of SARS-CoV-2 infection
Lu S , Peluso MJ , Glidden DV , Davidson MC , Lugtu K , Pineda-Ramirez J , Tassetto M , Garcia-Knight M , Zhang A , Goldberg SA , Chen JY , Fortes-Cobby M , Park S , Martinez A , So M , Donovan A , Viswanathan B , Hoh R , Donohue K , McIlwain DR , Gaudiliere B , Anglin K , Yee BC , Chenna A , Winslow JW , Petropoulos CJ , Deeks SG , Briggs-Hagen M , Andino R , Midgley CM , Martin JN , Saydah S , Kelly JD .
Nat Commun 2024 15 (1) 7466 type
Prevalence, patterns, and predictors of SARS-CoV-2 RNA and culturable virus in tears of case-ascertained household cohort
So M , Goldberg SA , Lu S , Garcia-Knight M , Davidson MC , Tassetto M , Murray VW , Anglin K , Pineda-Ramirez J , Chen JY , Rugart PR , Richardson ET , Briggs-Hagen M , Midgley CM , Andino R , Seitzman GD , Gonzales J , Peluso MJ , Martin JN , Kelly JD .
Am J Ophthalmol 2024 265 48-53 type
Travel surveillance uncovers dengue virus dynamics and introductions in the Caribbean
Taylor-Salmon E , Hill V , Paul LM , Koch RT , Breban MI , Chaguza C , Sodeinde A , Warren JL , Bunch S , Cano N , Cone M , Eysoldt S , Garcia A , Gilles N , Hagy A , Heberlein L , Jaber R , Kassens E , Colarusso P , Davis A , Baudin S , Rico E , Mejía-Echeverri Á , Scott B , Stanek D , Zimler R , Muñoz-Jordán JL , Santiago GA , Adams LE , Paz-Bailey G , Spillane M , Katebi V , Paulino-Ramírez R , Mueses S , Peguero A , Sánchez N , Norman FF , Galán JC , Huits R , Hamer DH , Vogels CBF , Morrison A , Michael SF , Grubaugh ND .
Nat Commun 2024 15 (1) 3508 type
Novel Oliveros-like Clade C mammarenaviruses from rodents in Argentina, 1990-2020
Shedroff E , Martin ML , Whitmer SLM , Brignone J , Garcia JB , Sen C , Nazar Y , Fabbri C , Morales-Betoulle M , Mendez J , Montgomery J , Morales MA , Klena JD .
Viruses 2024 16 (3) type
Recommendations for use of p16/Ki67 dual stain for management of individuals testing positive for human papillomavirus
Clarke MA , Wentzensen N , Perkins RB , Garcia F , Arrindell D , Chelmow D , Cheung LC , Darragh TM , Egemen D , Guido R , Huh W , Locke A , Lorey TS , Nayar R , Risley C , Saslow D , Smith RA , Unger ER , Massad LS .
J Low Genit Tract Dis 2024
Novel influenza A viruses in pigs with zoonotic potential, Chile
Tapia R , Brito B , Saavedra M , Mena J , García-Salum T , Rathnasinghe R , Barriga G , Tapia K , García V , Bucarey S , Jang Y , Wentworth D , Torremorell M , Neira V , Medina RA .
Microbiol Spectr 2024 e0218123 type
2019 ASCCP risk-based management consensus guidelines: Updates through 2023
Perkins RB , Guido RS , Castle PE , Chelmow D , Einstein MH , Garcia F , Huh WK , Kim JJ , Moscicki AB , Nayar R , Saraiya M , Sawaya GF , Wentzensen N , Schiffman M .
J Low Genit Tract Dis 2024 28 (1) 3-6
Assembly and phylogeographical analysis of novel Taenia solium mitochondrial genomes suggest stratification within the African-American genotype
Jiménez-Avalos G , Soto-Obando A , Solis M , Gilman RH , Cama V , Gonzalez AE , García HH , Sheen P , Requena D , Zimic M .
Parasit Vectors 2023 16 (1) 349 type
Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets
Haas KM , McGregor MJ , Bouhaddou M , Polacco BJ , Kim EY , Nguyen TT , Newton BW , Urbanowski M , Kim H , Williams MAP , Rezelj VV , Hardy A , Fossati A , Stevenson EJ , Sukerman E , Kim T , Penugonda S , Moreno E , Braberg H , Zhou Y , Metreveli G , Harjai B , Tummino TA , Melnyk JE , Soucheray M , Batra J , Pache L , Martin-Sancho L , Carlson-Stevermer J , Jureka AS , Basler CF , Shokat KM , Shoichet BK , Shriver LP , Johnson JR , Shaw ML , Chanda SK , Roden DM , Carter TC , Kottyan LC , Chisholm RL , Pacheco JA , Smith ME , Schrodi SJ , Albrecht RA , Vignuzzi M , Zuliani-Alvarez L , Swaney DL , Eckhardt M , Wolinsky SM , White KM , Hultquist JF , Kaake RM , García-Sastre A , Krogan NJ .
Nat Commun 2023 14 (1) 6030 type
Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)
Kuhn JH , Abe J , Adkins S , Alkhovsky SV , Avšič-Županc T , Ayllón MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Kumar Baranwal V , Beer M , Bejerman N , Bergeron É , Biedenkopf N , Blair CD , Blasdell KR , Blouin AG , Bradfute SB , Briese T , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Büttner C , Calisher CH , Cao M , Casas I , Chandran K , Charrel RN , Kumar Chaturvedi K , Chooi KM , Crane A , Dal Bó E , Carlos de la Torre J , de Souza WM , de Swart RL , Debat H , Dheilly NM , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Drexler JF , Duprex WP , Dürrwald R , Easton AJ , Elbeaino T , Ergünay K , Feng G , Firth AE , Fooks AR , Formenty PBH , Freitas-Astúa J , Gago-Zachert S , Laura García M , García-Sastre A , Garrison AR , Gaskin TR , Gong W , Gonzalez JJ , de Bellocq J , Griffiths A , Groschup MH , Günther I , Günther S , Hammond J , Hasegawa Y , Hayashi K , Hepojoki J , Higgins CM , Hongō S , Horie M , Hughes HR , Hume AJ , Hyndman TH , Ikeda K , Jiāng D , Jonson GB , Junglen S , Klempa B , Klingström J , Kondō H , Koonin EV , Krupovic M , Kubota K , Kurath G , Laenen L , Lambert AJ , Lǐ J , Li JM , Liu R , Lukashevich IS , MacDiarmid RM , Maes P , Marklewitz M , Marshall SH , Marzano SL , McCauley JW , Mirazimi A , Mühlberger E , Nabeshima T , Naidu R , Natsuaki T , Navarro B , Navarro JA , Neriya Y , Netesov SV , Neumann G , Nowotny N , Nunes MRT , Ochoa-Corona FM , Okada T , Palacios G , Pallás V , Papa A , Paraskevopoulou S , Parrish CR , Pauvolid-Corrêa A , Pawęska JT , Pérez DR , Pfaff F , Plemper RK , Postler TS , Rabbidge LO , Radoshitzky SR , Ramos-González PL , Rehanek M , Resende RO , Reyes CA , Rodrigues TCS , Romanowski V , Rubbenstroth D , Rubino L , Runstadler JA , Sabanadzovic S , Sadiq S , Salvato MS , Sasaya T , Schwemmle M , Sharpe SR , Shi M , Shimomoto Y , Kavi Sidharthan V , Sironi M , Smither S , Song JW , Spann KM , Spengler JR , Stenglein MD , Takada A , Takeyama S , Tatara A , Tesh RB , Thornburg NJ , Tian X , Tischler ND , Tomitaka Y , Tomonaga K , Tordo N , Tu C , Turina M , Tzanetakis IE , Maria Vaira A , van den Hoogen B , Vanmechelen B , Vasilakis N , Verbeek M , von Bargen S , Wada J , Wahl V , Walker PJ , Waltzek TB , Whitfield AE , Wolf YI , Xia H , Xylogianni E , Yanagisawa H , Yano K , Ye G , Yuan Z , Zerbini FM , Zhang G , Zhang S , Zhang YZ , Zhao L , Økland AL .
J Gen Virol 2023 104 (8)
Antibiotic consumption during the coronavirus disease 2019 pandemic and emergence of carbapenemase-producing klebsiella pneumoniae lineages among inpatients in a Chilean hospital: A time-series study and phylogenomic analysis
Allel K , Peters A , Conejeros J , Martínez JRW , Spencer-Sandino M , Riquelme-Neira R , Rivas L , Rojas P , Orellana Chea C , García P , Araos R , McGovern O , Patel TS , Arias CA , Lessa FC , Undurraga EA , Munita JM .
Clin Infect Dis 2023 77 S20-s28
Longitudinal and quantitative fecal shedding dynamics of SARS-CoV-2, pepper mild mottle virus, and crAssphage
Arts PJ , Kelly JD , Midgley CM , Anglin K , Lu S , Abedi GR , Andino R , Bakker KM , Banman B , Boehm AB , Briggs-Hagen M , Brouwer AF , Davidson MC , Eisenberg MC , Garcia-Knight M , Knight S , Peluso MJ , Pineda-Ramirez J , Diaz Sanchez R , Saydah S , Tassetto M , Martin JN , Wigginton KR .
mSphere 2023 8 (4) e0013223 type
Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2023)
Zerbini FM , Siddell SG , Lefkowitz EJ , Mushegian AR , Adriaenssens EM , Alfenas-Zerbini P , Dempsey DM , Dutilh BE , García ML , Hendrickson RC , Junglen S , Krupovic M , Kuhn JH , Lambert AJ , Łobocka M , Oksanen HM , Robertson DL , Rubino L , Sabanadzovic S , Simmonds P , Smith DB , Suzuki N , Van Doorslaer K , Vandamme AM , Varsani A .
Arch Virol 2023 168 (7) 175
DNA capture and enrichment: A culture-independent approach for characterizing the genomic diversity of pathogenic leptospira species
Stone NE , McDonough RF , Hamond C , LeCount K , Busch JD , Dirsmith KL , Rivera-Garcia S , Soltero F , Arnold LM , Weiner Z , Galloway RL , Schlater LK , Nally JE , Sahl JW , Wagner DM .
Microorganisms 2023 11 (5) type
Genomic epidemiology of SARS-CoV-2 in Cambodia, January 2020 to February 2021.
Su YCF , Ma JZJ , Ou TP , Pum L , Krang S , Raftery P , Kinzer MH , Bohl J , Ieng V , Kab V , Patel S , Sar B , Ying WF , Jayakumar J , Horm VS , Boukli N , Yann S , Troupin C , Heang V , Garcia-Rivera JA , Sengdoeurn Y , Heng S , Lay S , Chea S , Darapheak C , Savuth C , Khalakdina A , Ly S , Baril L , Manning JE , Simone-Loriere E , Duong V , Dussart P , Sovann L , Smith GJD , Karlsson EA .
Virus Evol 2023 9 (1) veac121 type
Adeno-associated virus type 2 in US children with acute severe hepatitis.
Servellita V , Gonzalez AS , Lamson DM , Foresythe A , Huh HJ , Bazinet AL , Bergman NH , Bull RL , Garcia KY , Goodrich JS , Lovett SP , Parker K , Radune D , Hatada A , Pan CY , Rizzo K , Bertumen JB , Morales C , Oluniyi PE , Nguyen J , Tan J , Stryke D , Jaber R , Leslie MT , Lyons Z , Hedman HD , Parashar U , Sullivan M , Wroblewski K , Oberste MS , Tate JE , Baker JM , Sugerman D , Potts C , Lu X , Chhabra P , Pediatric Hepatitis of Unknown Etiology Working Group , Ingram LA , Shiau H , Britt W , Sanchez LHG , Ciric C , Rostad CA , Vinjé J , Kirking HL , Wadford DA , Raborn RT , St George K , Chiu CY .
Nature 2023
Etiology of acute febrile illness in the peruvian amazon as determined by modular formatted quantitative PCR: a protocol for RIVERA, a health facility-based case-control study.
Peñataro Yori P , Paredes Olórtegui M , Schiaffino F , Colston JM , Pinedo Vasquez T , Garcia Bardales PF , Shapiama Lopez V , Zegarra Paredes LF , Perez K , Curico G , Flynn T , Zhang J , Ramal Asayag C , Meza Sanchez G , Silva Delgado H , Casapia Morales M , Casanova W , Jiu B , Oberhelman R , Munayco Escate C , Silver R , Henao O , Cooper KK , Liu J , Houpt ER , Kosek MN .
BMC Public Health 2023 23 (1) 674 type
Development of treatment-decision algorithms for children evaluated for pulmonary tuberculosis: an individual participant data meta-analysis.
Gunasekera KS , Marcy O , Muñoz J , Lopez-Varela E , Sekadde MP , Franke MF , Bonnet M , Ahmed S , Amanullah F , Anwar A , Augusto O , Aurilio RB , Banu S , Batool I , Brands A , Cain KP , Carratalá-Castro L , Caws M , Click ES , Cranmer LM , García-Basteiro AL , Hesseling AC , Huynh J , Kabir S , Lecca L , Mandalakas A , Mavhunga F , Myint AA , Myo K , Nampijja D , Nicol MP , Orikiriza P , Palmer M , Sant'Anna CC , Siddiqui SA , Smith JP , Song R , Thuong Thuong NT , Ung V , van der Zalm MM , Verkuijl S , Viney K , Walters EG , Warren JL , Zar HJ , Marais BJ , Graham SM , Debray TPA , Cohen T , Seddon JA .
Lancet Child Adolesc Health 2023 7 (5) 336-346
Burkholderia thailandensis Isolated from the Environment, United States.
Hall CM , Stone NE , Martz M , Hutton SM , Santana-Propper E , Versluis L , Guidry K , Ortiz M , Busch JD , Maness T , Stewart J , Sidwa T , Gee JE , Elrod MG , Petras JK , Ty MC , Gulvik C , Weiner ZP , Salzer JS , Hoffmaster AR , Rivera-Garcia S , Keim P , Kieffer A , Sahl JW , Soltero F , Wagner DM .
Emerg Infect Dis 2023 29 (3) 618-621 type
Four principles to establish a universal virus taxonomy.
Simmonds P , Adriaenssens EM , Zerbini FM , Abrescia NGA , Aiewsakun P , Alfenas-Zerbini P , Bao Y , Barylski J , Drosten C , Duffy S , Duprex WP , Dutilh BE , Elena SF , García ML , Junglen S , Katzourakis A , Koonin EV , Krupovic M , Kuhn JH , Lambert AJ , Lefkowitz EJ , Łobocka M , Lood C , Mahony J , Meier-Kolthoff JP , Mushegian AR , Oksanen HM , Poranen MM , Reyes-Muñoz A , Robertson DL , Roux S , Rubino L , Sabanadzovic S , Siddell S , Skern T , Smith DB , Sullivan MB , Suzuki N , Turner D , Van Doorslaer K , Vandamme AM , Varsani A , Vasilakis N .
PLoS Biol 2023 21 (2) e3001922 type
High Level of Pretreatment and Acquired Human Immunodeficiency Virus Drug Resistance in El Salvador: A Nationally Representative Survey, 2018-2019.
Girón-Callejas A , García-Morales C , Mendizabal-Burastero R , Quezada A , Ruiz L , Arguera N , Sorto S , Nieto AI , Tapia-Trejo D , López-Sánchez DM , Pérez-García M , Cruz L , Andino R , Sajquim E , Juárez SI , Farach N , Ravasi G , Northbrook S , Reyes-Terán G , Ávila-Ríos S .
Open Forum Infect Dis 2022 9 (11) ofac580 type
Leptospira borgpetersenii serovar Hardjo and Leptospira santarosai serogroup Pyrogenes isolated from bovine dairy herds in Puerto Rico.
Hamond C , Dirsmith KL , LeCount K , Soltero FV , Rivera-Garcia S , Camp P , Anderson T , Hicks JA , Galloway R , Sutherland G , Schafer IJ , Goris MGA , van der Linden H , Stuber T , Bayles DO , Schlater LK , Nally JE .
Front Vet Sci 2022 9 1025282
Meningococcal disease in North America: Updates from the Global Meningococcal Initiative.
Asturias EJ , Bai X , Bettinger JA , Borrow R , Castillo DN , Caugant DA , Chacon GC , Dinleyici EC , Aviles GE , Garcia L , Glennie L , Harrison LH , Howie RL , Itsko M , Lucidarme J , Marin JEO , Marjuki H , McNamara LA , Mustapha MM , Robinson JL , Romeu B , Sadarangani M , Sáez-Llorens X , Sáfadi MAP , Stephens DS , Stuart JM , Taha MK , Tsang RSW , Vazquez J , De Wals P .
J Infect 2022 85 (6) 611-622 type
Chapare Hemorrhagic Fever and Virus Detection in Rodents in Bolivia in 2019.
LoayzaMafayle R , Morales-Betoulle ME , Romero C , Cossaboom CM , Whitmer S , AlvarezAguilera CE , AvilaArdaya C , CruzZambrana M , DvalosAnajia A , MendozaLoayza N , Montao AM , MoralesAlvis FL , RevolloGuzmn J , SasasMartnez S , AlarcnDeLaVega G , MedinaRamrez A , MolinaGutirrez JT , CornejoPinto AJ , SalasBacci R , Brignone J , Garcia J , Aez A , Mendez-Rico J , Luz K , Segales A , TorrezCruz KM , Valdivia-Cayoja A , Amman BR , Choi MJ , Erickson BR , Goldsmith C , Graziano JC , Joyce A , Klena JD , Leach A , Malenfant JH , Nichol ST , Patel K , Sealy T , Shoemaker T , Spiropoulou CF , Todres A , Towner JS , Montgomery JM .
N Engl J Med 2022 386 (24) 2283-2294 type
Recent changes to virus taxonomy ratified by the International Committee on Taxonomy of Viruses (2022).
Walker PJ , Siddell SG , Lefkowitz EJ , Mushegian AR , Adriaenssens EM , Alfenas-Zerbini P , Dempsey DM , Dutilh BE , García ML , Curtis Hendrickson R , Junglen S , Krupovic M , Kuhn JH , Lambert AJ , Łobocka M , Oksanen HM , Orton RJ , Robertson DL , Rubino L , Sabanadzovic S , Simmonds P , Smith DB , Suzuki N , Van Doorslaer K , Vandamme AM , Varsani A , Zerbini FM .
Arch Virol 2022 167 (11) 2429-2440
Diverse lineages of pathogenic Leptospira species are widespread in the environment in Puerto Rico, USA.
Stone NE , Hall CM , Ortiz M , Hutton S , Santana-Propper E , Celona KR , Williamson CHD , Bratsch N , Fernandes LGV , Busch JD , Pearson T , Rivera-Garcia S , Soltero F , Galloway R , Sahl JW , Nally JE , Wagner DM .
PLoS Negl Trop Dis 2022 16 (5) e0009959 type
Prevalence and genetic characterization of noroviruses in children with acute gastroenteritis in Senegal, 2007-2010.
Kebe O , Fernandez-Garcia MD , Zinsou BE , Diop A , Fall A , Ndiaye N , Vinjé J , Ndiaye K .
J Med Virol 2021 94 (6) 2640-2644 type
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