CDC-Authored Genomics and Precision Health Publications Database
Last data update: Jun 20, 2025. (Total: 6727 publications)
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| Annual (2024) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)
Kuhn JH , Adkins S , Alkhovsky Альховский Сергей Владимирович SV , An 安雯霞 W , Avšič-Županc T , Ayllón MA , Bačnik K , Bahl J , Balkema-Buschmann A , Ballinger MJ , Beer M , Bejerman N , Bergeron É , Biedenkopf N , Blair CD , Blasdell KR , Bradfute SB , Briese T , Brown K , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Calisher CH , Calvelage S , Cao 曹孟籍 M , Casas I , Chabi-Jesus C , Chandran K , Charrel RN , Crane A , Cuypers LN , Bó ED , de la Torre JC , de Souza WM , de Swart RL , Debat HJ , Dheilly NM , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Drexler JF , Duprex WP , Dürrwald R , Easton AJ , Elbeaino T , Ergünay K , Eshak MIY , Feng 冯国忠 G , Firth AE , Fooks AR , Formenty PBH , Freitas-Astúa J , Freuling CM , Gadd T , Gago-Zachert S , García ML , García-Sastre A , Garrison AR , Goldberg TL , Gonzalez JJ , Goüy de Bellocq J , Griffiths A , Groschup MH , Gryseels S , Gutiérrez-Aguirre I , Günther S , Hammond J , Hepojoki J , Horie 堀江真行 M , Hume AJ , Hyndman TH , Höper D , Jiāng 姜道宏 D , Junglen S , Klempa B , Klingström J , Kondō 近藤秀樹 H , Koonin EV , Krupovic M , Kubota 久保田健嗣 K , Kurath G , Kutnjak D , Laenen L , Lambert AJ , Lee B , Li 李呈宇 C , Lǐ 李建荣 J , Li 李俊敏 JM , Lukashevich IS , Maes P , Marklewitz M , Marshall SH , Marzano SL , McCauley JW , Mehle N , Mirazimi A , Morikawa 守川俊幸 T , Mühlberger E , Müller T , Naidu R , Natsuaki 夏秋知英 T , Navarro B , Navarro JA , Neriya 煉谷裕太朗 Y , Netesov Нетёсов Сергей Викторович SV , Nicoloso VM , Neumann G , Nokireki T , Nowotny N , Nunes MRT , Ochoa-Corona FM , Palacios G , Pallás V , Papa Άννα Παπά A , Paraskevopoulou Σοφία Παρασκευοπούλου S , Parrish CR , Pauvolid-Corrêa A , Pecman A , Pérez DR , Pfaff F , Plemper RK , Postler TS , Radoshitzky SR , Ramos-González PL , Ravnikar M , Resende RO , Reuter G , Reyes CA , Rivarez MPS , Romanowski V , Rubbenstroth D , Rubino L , Runstadler JA , Ruiz-Padilla A , Sabanadzovic S , Salvato MS , Sasaya 笹谷孝英 IT , Schmaljohn CS , Schmidt-Posthaus H , Schwemmle M , Seljak G , Seuberlich T , Shi 施莽 M , Shimomoto 下元祥史 Y , Simmonds P , Sironi M , Smith DB , Smither S , Song 송진원 JW , Spann KM , Spengler JR , Stenglein MD , Takada 高田礼人 A , Takemura C , Tammiranta N , Tesh RB , Thornburg NJ , Tischler ND , Tomitaka 冨髙保弘 Y , Tomonaga 朝長啓造 K , Tordo N , Turina M , Tzanetakis Ιωάννης Ε Τζανετάκης IE , Vaira AM , van den Hoogen B , Vanmechelen B , Vasilakis Νίκος Βασιλάκης N , Verbeek M , von Bargen S , Vučurović A , Wada 和田治郎 J , Wahl V , Walker PJ , Wang 王飞 F , Whitfield AE , Williams JV , Wolf YI , Yanagisawa 栁澤広宣 H , Yang 杨彩霞 C , Ye 叶恭银 G , Yu 于美春 MC , Zerbini FM , Zhang S , Økland AL , Hughes HR . J Gen Virol 2025 106 (6) |
| Establishment of epidemiological cutoff values for Fonsecaea pedrosoi, the primary etiologic agent of chromoblastomycosis, and eight antifungal medications
Smith DJ , Melhem MSC , Dirven J , de Azevedo CMPeS , Marques SG , Jacomel Favoreto de Souza Lima B , Vicente VA , Teixeira Sousa Md G , Venturini J , Wiederhold NP , Seyedmousavi A , Dufresne PJ , de Hoog S , Lockhart SR , Hagen F , Santos DWdCL . J Clin Microbiol 2025 63 (5) e0190324 
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| Evaluating the Test-Negative Design for COVID-19 Vaccine Effectiveness Using Randomized Trial Data: A Secondary Cross-Protocol Analysis of 5 Randomized Clinical Trials
Andrews LIB , Halloran ME , Neuzil KM , van der Laan L , Huang Y , Andriesen J , Patel M , Fisher LH , Janes H , Rouphael N , Walsh SR , Theodore DA , Tieu HV , Sobieszczyk M , El Sahly HM , Baden LR , Falsey AR , Campbell TB , Kelley CF , Healy CM , Immergluck L , Luft B , Hirsch I , de Bruyn G , Truyers C , Priddy F , Sumner KM , Flannery B , Follmann D , Gilbert PB . JAMA Netw Open 2025 8 (5) e2512763 |
| Avian Influenza A(H5N1) Isolated from Dairy Farm Worker, Michigan
Brock N , Pulit-Penaloza JA , Belser JA , Pappas C , Sun X , Kieran TJ , Zeng H , De La Cruz JA , Hatta Y , Di H , Davis CT , Tumpey TM , Maines TR . Emerg Infect Dis 2025 31 (6)
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| Trichophyton indotineae Infection, São Paulo, Brazil, 2024
de Almeida JN Jr , Dos Santos AR , Trindade MRS , Gold JAW , Razo FPM , Gonçalves SS , Dorlass EG , de Mello Ruiz R , Pasternak J , Mangueira CLP , Uhrlaß S , Nenoff P , Verma SB , Doi AM , Martino MDV . Emerg Infect Dis 2025 31 (5) 1049-1051 |
| Tropheryma whipplei Infections, Mexico, 2019-2021
Delgado-de la Mora J , Grube-Pagola P , Paddock CD , DeLeon-Carnes M , Laga AC , Solomon IH , Remes-Troche JM , Baquera-Heredia JJ , Quintero-Bustos G , León-Contreras JC , Ángeles-Ángeles A , Martínez-Benítez B . Emerg Infect Dis 2025 31 (5) 991-994 |
| Exome Sequencing to Identify Novel Susceptibility Genes for Nonsyndromic Split-Hand/Ft Malformation: A Report From the National Birth Defects Prevention Study
Carter TC , Kay DM , Pangilinan F , Almli LM , Jenkins MM , Blue EE , Sok P , White JJ , Cunniff CM , Agopian AJ , Bamshad MJ , Botto LD , Brody LC , Gucsavas-Calikoglu M , Chong JX , Gomez-Acevedo H , Lupo PJ , Moore CA , Nembhard WN , Olney RS , Olshan AF , Orloff MS , Reefhuis J , Romitti PA , Shaw GM , Werler MM , Yazdy MM , Browne ML , Howley MM . Birth Defects Res 2025 117 (5) e2472 |
| De novo virulence feature discovery and risk assessment in Klebsiella pneumoniae based on microbial genome vectorization
Beck KL , Agarwal A , Laufer Halpin A , McDonald LC , McKay SL , Kent AG , Kaufman JH , Mukherjee V , Elkins CA , Seabolt E . Commun Biol 2025 8 (1) 623 |
| Machine learning to improve HIV screening using routine data in Kenya
Friedman JD , Mwangi JM , Muthoka KJ , Otieno BA , Odhiambo JO , Miruka FO , Nyagah LM , Mwele PM , Obat EO , Omoro GO , Ndisha MM , Kimanga DO . J Int AIDS Soc 2025 28 (4) e26436 |
| Integrated serological surveillance of communicable diseases in the Paraguayan Chaco, 2019
Galeano P , Huber C , Ortiz V , Araya S , Pérez VT , Sequera G , Ade MP , Rey-Benito G , Bravo P , Luciañez A , Montoya R , Ibarra-Ozcariz SG , De Egea V , Cabello Á , Morice A , Saboyá-Díaz MI , Goodhew EB , Cooley G , Martin D . Rev Panam Salud Publica 2025 49 e25
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| Metagenomic Identification of Fusarium solani Strain as Cause of US Fungal Meningitis Outbreak Associated with Surgical Procedures in Mexico, 2023
Chiu CY , Servellita V , de Lorenzi-Tognon M , Benoit P , Sumimoto N , Foresythe A , Cerqueira FM , Williams-Bouyer N , Ren P , Herrera LNS , Gaston DC , Sayyad L , Whitmer SL , Klena J , Vikram HR , Gold JAW , Gade L , Parnell L , Misas E , Chiller TM , Griffin IS , Basavaraju SV , Smith DJ , Litvintseva AP , Chow NA . Emerg Infect Dis 2025 31 (5)
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| Outbreak of Marburg Virus Disease, Equatorial Guinea, 2023
Ngai S , Evers ES , Seoane AKL , Ameh G , Anoko JN , Barnadas C , Choi MJ , Diaz J , Fontana L , Formenty P , Nezu IH , Jacquerioz F , Klena J , Laurenson-Schafer H , de Waroux OLP , Legand A , Carrera RM , Metcalf T , Montgomery J , Morreale S , Negrón ME , Nvé JO , Ayekaba MO , Pavlin BI , Shoemaker T , Hernandez YT , Venta MV , Gutierrez EZ , Ndoho FAO . Emerg Infect Dis 2025 31 (5)
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| Annual estimation of seasonal influenza burden in 6 South American countries: A retrospective analysis of SARInet surveillance data to inform policies
Descalzo MA , de Paula Júnior FJ , Vergara Mallegas N , Penayo E , Voto C , Goñi N , Bruno A , Ferreira da Almeida WA , Ikeda do Carmo GM , Olivares Barraza MF , Fasce R , Pacheco J , Vázquez C , Von Horoch M , Battaglia S , Giovacchini C , Baumeister E , Santoro A , Buyayisqui MP , Alegretti M , Escobar Naranjo MP , Jara JH , Nogareda F , Rodríguez Á , Alvis-Zakzuk NJ , Iuliano AD , Azziz-Baumgartner E , Tempia S , Leite JA , Rondy M , Couto P . J Infect Dis 2025 231 S123-s132
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| The Epidemiology and Burden of Human Parainfluenza Virus Hospitalizations in U.S. Children
Weinberg GA , de St Maurice AM , Qwaider YZ , Stopczynski T , Amarin JZ , Stewart LS , Williams JV , Michaels MG , Sahni LC , Boom JA , Spieker AJ , Klein EJ , Englund JA , Staat MA , Schlaudecker EP , Selvarangan R , Schuster JE , Harrison CJ , Derado G , Toepfer AP , Moline HL , Halasa NB , Szilagyi PG . J Pediatric Infect Dis Soc 2025
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| WHO malaria nucleic acid amplification test external quality assessment scheme: results of eleven distributions over 6 years
Thomson RM , Cunningham JA , Gatton MM , Murphy SC , de la Paz Ade M , Ding XC , Incardona S , Legrand E , Lucchi N , Menard D , Nsobya SL , Saez AC , Shrivastava J , Chiodini PL . Malar J 2025 24 (1) 94
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| Population-level respiratory virus-virus interactions, Puerto Rico, 2013-2023
Madewell ZJ , Wong JM , Thayer MB , Rivera-Amill V , Sainz de la Peña D , Pasarell JB , Paz-Bailey G , Adams LE , Yang Y . Int J Infect Dis 2025 107878
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| Investigating two decades of Streptococcus pneumoniae bacteraemia in the Gelderland area, the Netherlands, using whole-genome sequencing
Sanches Ferreira AD , King AC , Wolters F , Wertheim HFL , Mulder B , Swanink CMA , van der Gaast-de Jongh CE , Arends DW , van Sorge NM , Schaars C , Hung HCH , Hawkins PA , McGee L , Bentley SD , Veening JW , de Jonge MI , Lo SW , Cremers AJH . Microb Genom 2025 11 (3)
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| Epidemiology of human metapneumovirus among children with severe or very severe pneumonia in high pneumonia burden settings: the PERCH study experience
Miyakawa R , Zhang H , Brooks WA , Prosperi C , Baggett HC , Feikin DR , Hammitt LL , Howie SRC , Kotloff KL , Levine OS , Madhi SA , Murdoch DR , O'Brien KL , Scott JAG , Thea DM , Antonio M , Awori JO , Bunthi C , Driscoll AJ , Ebruke B , Fancourt NS , Higdon MM , Karron RA , Moore DP , Morpeth SC , Mulindwa JM , Park DE , Rahman MZ , Rahman M , Salaudeen RA , Sawatwong P , Seidenberg P , Sow SO , Tapia MD , Deloria Knoll M . Clin Microbiol Infect 2025 31 (3) 441-450 |
| Ongoing symptoms after acute SARS-CoV-2 or influenza infection in a case-ascertained household transmission study: 7 US Sites, 2021-2023
Bullock A , Dalton AF , Stockwell MS , McLaren SH , Sano E , Nguyen HQ , Rao S , Asturias E , Lutrick K , Ellingson KD , Maldonado Y , Mellis AM , Smith-Jeffcoat SE , Grijalva CG , Talbot HK , Rolfes MAR , Biddle JE , Zhu Y , Ledezma K , Pryor K , Valdez de Romero A , Vargas C , Petrie JG , Floris-Moore M , Bowman N . Clin Infect Dis 2025
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| Global guideline for the diagnosis and management of candidiasis: an initiative of the ECMM in cooperation with ISHAM and ASM
Cornely OA , Sprute R , Bassetti M , Chen SC , Groll AH , Kurzai O , Lass-Flörl C , Ostrosky-Zeichner L , Rautemaa-Richardson R , Revathi G , Santolaya ME , White PL , Alastruey-Izquierdo A , Arendrup MC , Baddley J , Barac A , Ben-Ami R , Brink AJ , Grothe JH , Guinea J , Hagen F , Hochhegger B , Hoenigl M , Husain S , Jabeen K , Jensen HE , Kanj SS , Koehler P , Lehrnbecher T , Lewis RE , Meis JF , Nguyen MH , Pana ZD , Rath PM , Reinhold I , Seidel D , Takazono T , Vinh DC , Zhang SX , Afeltra J , Al-Hatmi AMS , Arastehfar A , Arikan-Akdagli S , Bongomin F , Carlesse F , Chayakulkeeree M , Chai LYA , Chamani-Tabriz L , Chiller T , Chowdhary A , Clancy CJ , Colombo AL , Cortegiani A , Corzo Leon DE , Drgona L , Dudakova A , Farooqi J , Gago S , Ilkit M , Jenks JD , Klimko N , Krause R , Kumar A , Lagrou K , Lionakis MS , Lmimouni BE , Mansour MK , Meletiadis J , Mellinghoff SC , Mer M , Mikulska M , Montravers P , Neoh CF , Ozenci V , Pagano L , Pappas P , Patterson TF , Puerta-Alcalde P , Rahimli L , Rahn S , Roilides E , Rotstein C , Ruegamer T , Sabino R , Salmanton-García J , Schwartz IS , Segal E , Sidharthan N , Singhal T , Sinko J , Soman R , Spec A , Steinmann J , Stemler J , Taj-Aldeen SJ , Talento AF , Thompson GR 3rd , Toebben C , Villanueva-Lozano H , Wahyuningsih R , Weinbergerová B , Wiederhold N , Willinger B , Woo PCY , Zhu LP . Lancet Infect Dis 2025 |
| Effectiveness of 2023 Southern Hemisphere influenza vaccines against severe influenza-associated illness: pooled estimates from eight countries using the test-negative design
Radhika Radhika , Gharpure Allen C , Regan Annette K , Nogareda Francisco , Cheng Christopher C , George Siobhan St , Huang QSue , Wood Tim , Anglemyer Andrew , Prasert Kriengkrai , Praphasiri Prabda , Davis William W , Pittayawonganon Chakrarat , Ercole Regina , Iturra Analia , de Almeida Walquiria Aparecida Ferreira , de Paula Junior Francisco Jose , Avendano Vigueras Marcela , Olivares Barraza Maria Fernanda , Dominguez Chavely , Penayo Elena , Goni Natalia , Tritten Daiana , Couto Paula , Salas Daniel , Fowlkes Ashley L , Duca Lindsey M , Azziz-Baumgartner Eduardo , Sullivan Sheena G . Lancet Glob Health 2025 13 (2) e203-e211
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| Global impact of 10- and 13-valent pneumococcal conjugate vaccines on pneumococcal meningitis in all ages: The PSERENADE project
Yang Y , Knoll MD , Herbert C , Bennett JC , Feikin DR , Garcia Quesada M , Hetrich MK , Zeger SL , Kagucia EW , Xiao M , Cohen AL , van der Linden M , du Plessis M , Yildirim I , Winje BA , Varon E , Valenzuela MT , Valentiner-Branth P , Steens A , Scott JA , Savrasova L , Sanz JC , Khan AS , Oishi K , Nzoyikorera N , Nuorti JP , Mereckiene J , McMahon K , McGeer A , Mackenzie GA , MacDonald L , Ladhani SN , Kristinsson KG , Kleynhans J , Kellner JD , Jayasinghe S , Ho PL , Hilty M , Hammitt LL , Guevara M , Gilkison C , Gierke R , Desmet S , De Wals P , Dagan R , Colzani E , Ciruela P , Chuluunbat U , Chan G , Camilli R , Bruce MG , Brandileone MC , Ampofo K , O'Brien KL , Hayford K . J Infect 2025 90 (3) 106426 |
| Update on the evolving landscape of pneumococcal capsule types: new discoveries and way forward
Ganaie FA , Beall BW , Yu J , van der Linden M , McGee L , Satzke C , Manna S , Lo SW , Bentley SD , Ravenscroft N , Nahm MH . Clin Microbiol Rev 2025 e0017524
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| Secreted small RNAs of Naegleria fowleri are biomarkers for diagnosis of primary amoebic meningoencephalitis
Russell AC , Dainis J , Alexander J , Ali IKM , Kyle DE . bioRxiv 2025
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| Delay of innate immune responses following influenza B virus infection affects the development of a robust antibody response in ferrets
Rowe T , Fletcher A , Lange M , Hatta Y , Jasso G , Wentworth DE , Ross TM . mBio 2025 e0236124 |
| Building a growing genomic repository for maternal and fetal health through the PING Consortium
Abdelmalek CM , Singh S , Fasil B , Horvath AR , Mulkey SB , Curé C , Campos M , Cavalcanti DP , Tong VT , Mercado M , Daza M , Benavides MM , Acosta J , Gilboa S , Valencia D , Sancken CL , Newton S , Scalabrin DMF , Mussi-Pinhata MM , Vasconcelos Z , Chakhtoura N , Moye J , Leslie EJ , Bulas D , Vezina G , Marques FJP , Leyser M , Del Campo M , Vilain E , DeBiasi RL , Wang T , Nath A , Haydar T , Muenke M , Mansour TA , du Plessis AJ , Murray JC , Cordero JF , Kousa YA . Pediatr Res 2025
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| Molecular epidemiology of invasive group B Streptococcus in South Africa, 2019-2020
Ntozini B , Walaza S , Metcalf B , Hazelhurst S , de Gouveia L , Meiring S , Mogale D , Mtshali S , Ismail A , Ndlangisa K , Du Plessis M , Quan V , Chochua S , McGee L , von Gottberg A , Wolter N . J Infect Dis 2024
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| Global impact of ten-valent and 13-valent pneumococcal conjugate vaccines on invasive pneumococcal disease in all ages (the PSERENADE project): a global surveillance analysis
Bennett JC , Deloria Knoll M , Kagucia EW , Garcia Quesada M , Zeger SL , Hetrich MK , Yang Y , Herbert C , Ogyu A , Cohen AL , Yildirim I , Winje BA , von Gottberg A , Viriot D , van der Linden M , Valentiner-Branth P , Suga S , Steens A , Skoczynska A , Sinkovec Zorko N , Scott JA , Savulescu C , Savrasova L , Sanz JC , Russell F , Ricketson LJ , Puentes R , Nuorti JP , Mereckiene J , McMahon K , McGeer A , Mad'arová L , Mackenzie GA , MacDonald L , Lepp T , Ladhani SN , Kristinsson KG , Kozakova J , Klein NP , Jayasinghe S , Ho PL , Hilty M , Heyderman RS , Hasanuzzaman M , Hammitt LL , Guevara M , Grgic-Vitek M , Gierke R , Georgakopoulou T , Galloway Y , Diawara I , Desmet S , De Wals P , Dagan R , Colzani E , Cohen C , Ciruela P , Chuluunbat U , Chan G , Camilli R , Bruce MG , Brandileone MC , Bigogo G , Ampofo K , O'Brien KL , Feikin DR , Hayford K . Lancet Infect Dis 2024 |
| Serotype distribution of remaining invasive pneumococcal disease after extensive use of ten-valent and 13-valent pneumococcal conjugate vaccines (the PSERENADE project): a global surveillance analysis
Garcia Quesada M , Peterson ME , Bennett JC , Hayford K , Zeger SL , Yang Y , Hetrich MK , Feikin DR , Cohen AL , von Gottberg A , van der Linden M , van Sorge NM , de Oliveira LH , de Miguel S , Yildirim I , Vestrheim DF , Verani JR , Varon E , Valentiner-Branth P , Tzanakaki G , Sinkovec Zorko N , Setchanova LP , Serhan F , Scott KJ , Scott JA , Savulescu C , Savrasova L , Reyburn R , Oishi K , Nuorti JP , Napoli D , Mwenda JM , Muñoz-Almagro C , Morfeldt E , McMahon K , McGeer A , Mad'arová L , Mackenzie GA , Eugenia León M , Ladhani SN , Kristinsson KG , Kozakova J , Kleynhans J , Klein NP , Kellner JD , Jayasinghe S , Ho PL , Hilty M , Harker-Jones MA , Hammitt LL , Grgic-Vitek M , Gilkison C , Gierke R , French N , Diawara I , Desmet S , De Wals P , Dalby T , Dagan R , Corcoran M , Colzani E , Chanto Chacón G , Castilla J , Camilli R , Ang M , Ampofo K , Almeida SCG , Alarcon P , O'Brien KL , Deloria Knoll M . Lancet Infect Dis 2024 |
| An influenza mRNA vaccine protects ferrets from lethal infection with highly pathogenic avian influenza A(H5N1) virus
Hatta M , Hatta Y , Choi A , Hossain J , Feng C , Keller MW , Ritter JM , Huang Y , Fang E , Pusch EA , Rowe T , De La Cruz JA , Johnson MC , Liddell J , Jiang N , Stadlbauer D , Liu L , Bhattacharjee AK , Rouse JR , Currier M , Wang L , Levine MZ , Kirby MK , Steel J , Di H , Barnes JR , Henry C , Davis CT , Nachbagauer R , Wentworth DE , Zhou B . Sci Transl Med 2024 16 (778) eads1273 |
- Page last reviewed:Feb 1, 2024
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