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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Aug 15, 2025. (Total: 6773 publications)
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Records 1-30 (of 164 Records)
Query Trace: Coronavirus[original query]
Performance of novel digital real-time PCR for detection of SARS-CoV-2, respiratory syncytial viruses, and influenza viruses in Ghana
Owusu M , Nkrumah B , Acheampong G , Opoku Afriyie S , Addae EK , Larbi R , Ansah RO , Kubio C , Saeed F , Ayisi-Boateng NK , Darko E , Amonoo-Neizer J , Owusu-Ansah AG , Ayensu F , Brenya PK , Bannor V , Angra P , Barradas DT .
Microbiol Spectr 2025 e0321924
Severe Acute Respiratory Syndrome Coronavirus 2 Seroprevalence, Illness Recall, and Work Absenteeism Among Healthcare Workers: A Facility-Based Cross-Sectional Study in the Philippines, 2021
Subido-Cariño MT , Donadel M , Asi LD , Ariola-Ramos MS , Arguelles VL , Co SN , Mahon G , Fernandez SPC , Punzalan KA , Sornillo JB , Smith R , Westercamp M , Hechanova-Cruz RA .
Clin Infect Dis 2025
Skilled nursing facility wastewater surveillance: a SARS-CoV-2 and antimicrobial resistance detection pilot study
Santiago AJ , Burgos Garay M , Campbell M , Cahela Y , Donlan R , Gable P , Ganim Kyros C , Franco L , Kartforosh L , Lenz S , Lyons AK , Moore J , Noble-Wang J , Sanders C , Abera B , Adler CH , Jones S , Medrzycki M , Walters MS , Cook P , Li Y , Tao Y , Zhang J , Malapati L , Retchless A , Tong S , Coulliette-Salmond AD .
J Water Health 2025 23 (6) 727-742
Utilizing Whole Genome Sequencing to Investigate a Coronavirus Disease 2019 Cluster Among Healthcare Workers in a Tertiary Care Facility in the Philippines: Insights and Implications for Infection Prevention and Control
de Guzman Betito G , Magleby R , Caoili JC , Caravas J , Lemuel Ybañez M , Moser K , Westercamp M , Tarcela Gler M .
Clin Infect Dis 2025
Evaluating the Test-Negative Design for COVID-19 Vaccine Effectiveness Using Randomized Trial Data: A Secondary Cross-Protocol Analysis of 5 Randomized Clinical Trials
Andrews LIB , Halloran ME , Neuzil KM , van der Laan L , Huang Y , Andriesen J , Patel M , Fisher LH , Janes H , Rouphael N , Walsh SR , Theodore DA , Tieu HV , Sobieszczyk M , El Sahly HM , Baden LR , Falsey AR , Campbell TB , Kelley CF , Healy CM , Immergluck L , Luft B , Hirsch I , de Bruyn G , Truyers C , Priddy F , Sumner KM , Flannery B , Follmann D , Gilbert PB .
JAMA Netw Open 2025 8 (5) e2512763
Coronavirus Disease 2019 Symptoms by Immunity Status and Predominant-Variant Period Among US Blood Donors
McCullough MD , Spencer BR , Shi J , Plumb ID , Haynes JM , Shah M , Briggs-Hagen M , Stramer SL , Jones JM , Midgley CM .
Open Forum Infect Dis 2025 12 (5) ofaf185
SARS-CoV-2 dynamics in New York City during March 2020-August 2023
Yang W , Parton H , Li W , Watts EA , Lee E , Yuan H .
Commun Med (Lond) 2025 5 (1) 102 type
Association of mRNA COVID-19 vaccination and reductions in Post-COVID Conditions following SARS-CoV-2 infection in a US prospective cohort of essential workers
Mak J , Khan S , Britton A , Rose S , Gwynn L , Ellingson KD , Meece J , Feldstein LR , Tyner H , Edwards LJ , Thiese MS , Naleway A , Gaglani M , Solle N , Burgess JL , Lamberte JM , Shea M , Hunt-Smith T , Caban-Martinez A , Porter C , Wiegand R , Rai R , Hegmann KT , Hollister J , Fowlkes A , Wesley M , Philips AL , Rivers P , Bloodworth R , Newes-Adeyi G , Olsho LEW , Yoon SK , Saydah S , Lutrick K .
J Infect Dis 2025 231 (3) 665-676 type
Comparative analysis of environmental persistence of SARS-CoV-2 variants and seasonal coronaviruses
Park GW , Reija B , Tamin A , Hicks H , Flanders MH , Metz JM , Fan S , Harcourt JL , Folster JM , Thornburg N , Vinjé J .
Appl Environ Microbiol 2025 e0168824 type
Ongoing symptoms after acute SARS-CoV-2 or influenza infection in a case-ascertained household transmission study: 7 US Sites, 2021-2023
Bullock A , Dalton AF , Stockwell MS , McLaren SH , Sano E , Nguyen HQ , Rao S , Asturias E , Lutrick K , Ellingson KD , Maldonado Y , Mellis AM , Smith-Jeffcoat SE , Grijalva CG , Talbot HK , Rolfes MAR , Biddle JE , Zhu Y , Ledezma K , Pryor K , Valdez de Romero A , Vargas C , Petrie JG , Floris-Moore M , Bowman N .
Clin Infect Dis 2025 type
Protection from COVID-19 vaccination and prior SARS-CoV-2 infection among children aged 6 months–4 years, United States, September 2022–April 2023
Feldstein Leora R , Ruffin Jasmine , Wiegand Ryan , Grant Lauren , Babu Tara M , Briggs-Hagen Melissa , Burgess Jefferey L , Caban-Martinez Alberto J , Chu Helen Y , Ellingson Katherine D , Englund Janet A , Hegmann Kurt T , Jeddy Zuha , Kuntz Jennifer , Lauring Adam S , Lutrick Karen , Martin Emily T , Mathenge Clare , Meece Jennifer , Midgley Claire M .
J Pediatric Infect Dis Soc 2025 14 (1) 1-7 type
Ratio of infections to COVID-19 cases and hospitalizations in the United States based on SARS-CoV-2 seroprevalence data, September 2021-February 2022
Deng Y , Kim Y , Bratcher A , Jones JM , Simuzingili M , Gundlapalli AV , Hagen MB , Iachan R , Clarke KEN .
Open Forum Infect Dis 2025 12 (1) ofae719
Genomic epidemiology of early SARS-CoV-2 transmission dynamics in Bangladesh
Carnegie L , McCrone JT , du Plessis L , Hasan M , Ali MZ , Begum R , Hassan MZ , Islam S , Rahman MH , Uddin ASM , Sarker MS , Das T , Hossain M , Khan M , Razu MH , Akram A , Arina S , Hoque E , Molla MMA , Nafisaa T , Angra P , Rambaut A , Pullan ST , Osman KL , Hoque MA , Biswas P , Flora MS , Raghwani J , Fournié G , Samad MA , Hill SC .
Virol J 2024 21 (1) 291 type
Sequence-matching adapter trimmers generate consistent quality and assembly metrics for Illumina sequencing of RNA viruses
Nabakooza G , Wagner DD , Momin N , Marine RL , Weldon WC , Oberste MS .
BMC Res Notes 2024 17 (1) 308 type
Impact of COVID-19 on myalgic encephalomyelitis/chronic fatigue syndrome-like illness prevalence: A cross-sectional survey
Wood MS , Halmer N , Bertolli J , Amsden LB , Nugent JR , Lin JS , Rothrock G , Nadle J , Chai SJ , Cope JR , Champsi JH , Yang J , Unger ER , Skarbinski J .
PLoS One 2024 19 (9) e0309810
Discovery and characterization of a pan-betacoronavirus S2-binding antibody
Johnson NV , Wall SC , Kramer KJ , Holt CM , Periasamy S , Richardson SI , Manamela NP , Suryadevara N , Andreano E , Paciello I , Pierleoni G , Piccini G , Huang Y , Ge P , Allen JD , Uno N , Shiakolas AR , Pilewski KA , Nargi RS , Sutton RE , Abu-Shmais AA , Parks R , Haynes BF , Carnahan RH , Crowe JE Jr , Montomoli E , Rappuoli R , Bukreyev A , Ross TM , Sautto GA , McLellan JS , Georgiev IS .
Structure 2024 type
SARS-CoV-2 correlates of protection from infection against variants of concern
Sun K , Bhiman JN , Tempia S , Kleynhans J , Madzorera VS , Mkhize Q , Kaldine H , McMorrow ML , Wolter N , Moyes J , Carrim M , Martinson NA , Kahn K , Lebina L , du Toit JD , Mkhencele T , von Gottberg A , Viboud C , Moore PL , Cohen C .
Nat Med 2024
COVID-19 Across Pandemic Variant Periods: The Severe Acute Respiratory Infection-Preparedness (SARI-PREP) Study
Mukherjee V , Postelnicu R , Parker C , Rivers PS , Anesi GL , Andrews A , Ables E , Morrell ED , Brett-Major DM , Broadhurst MJ , Cobb JP , Irwin A , Kratochvil CJ , Krolikowski K , Kumar VK , Landsittel DP , Lee RA , Liebler JM , Segal LN , Sevransky JE , Srivastava A , Uyeki TM , Wurfel MM , Wyles D , Evans LE , Lutrick K , Bhatraju PK .
Crit Care Explor 2024 6 (7) e1122
A pan-respiratory antiviral chemotype targeting a transient host multi-protein complex
Michon M , Müller-Schiffmann A , Lingappa AF , Yu SF , Du L , Deiter F , Broce S , Mallesh S , Crabtree J , Lingappa UF , Macieik A , Müller L , Ostermann PN , Andrée M , Adams O , Schaal H , Hogan RJ , Tripp RA , Appaiah U , Anand SK , Campi TW , Ford MJ , Reed JC , Lin J , Akintunde O , Copeland K , Nichols C , Petrouski E , Moreira AR , Jiang IT , DeYarman N , Brown I , Lau S , Segal I , Goldsmith D , Hong S , Asundi V , Briggs EM , Phyo NS , Froehlich M , Onisko B , Matlack K , Dey D , Lingappa JR , Prasad DM , Kitaygorodskyy A , Solas D , Boushey H , Greenland J , Pillai S , Lo MK , Montgomery JM , Spiropoulou CF , Korth C , Selvarajah S , Paulvannan K , Lingappa VR .
Open Biol 2024 14 (6) 230363 type
Symptoms, viral loads, and rebound among COVID-19 outpatients treated with nirmatrelvir/ritonavir compared to propensity score matched untreated individuals
Smith-Jeffcoat SE , Biddle JE , Talbot HK , Morrissey KG , Stockwell MS , Maldonado Y , McLean HQ , Ellingson KD , Bowman NM , Asturias E , Mellis AM , Johnson S , Kirking HL , Rolfes MAR , Olivo V , Merrill L , Battan-Wraith S , Sano E , McLaren SH , Vargas CY , Goodman S , Sarnquist CC , Govindaranjan P , Petrie JG , Belongia EA , Ledezma K , Pryor K , Lutrick K , Bullock A , Yang A , Haehnel Q , Rao S , Zhu Y , Schmitz J , Hart K , Grijalva CG , Salvatore PP .
Clin Infect Dis 2024 78 (5) 1175-1184 type
Antigenic characterization of circulating and emerging SARS-CoV-2 variants in the U.S. Throughout the Delta to Omicron waves
Di H , Pusch EA , Jones J , Kovacs NA , Hassell N , Sheth M , Lynn KS , Keller MW , Wilson MM , Keong LM , Cui D , Park SH , Chau R , Lacek KA , Liddell JD , Kirby MK , Yang G , Johnson M , Thor S , Zanders N , Feng C , Surie D , DeCuir J , Lester SN , Atherton L , Hicks H , Tamin A , Harcourt JL , Coughlin MM , Self WH , Rhoads JP , Gibbs KW , Hager DN , Shapiro NI , Exline MC , Lauring AS , Rambo-Martin B , Paden CR , Kondor RJ , Lee JS , Barnes JR , Thornburg NJ , Zhou B , Wentworth DE , Davis CT .
Vaccines (Basel) 2024 12 (5) type
Risk factors for severe COVID-19 among children and adolescents enrolled in acute respiratory infection sentinel surveillance in South Africa, 2020-2022
Bishop K , Meiring S , Tempia S , von Gottberg A , Wolter N , Kleynhans J , Moosa F , du Plessis M , Moyes J , Makhasi M , Chuene B , Samuels AM , Dawood H , Reubenson G , Zar HJ , Quan V , Cohen C , Walaza S .
Influenza Other Respir Viruses 2024 18 (5) e13300
Mortality associated with SARS-CoV-2 in nondomestic felids
Drozd M , Ritter JM , Samuelson JP , Parker M , Wang L , Sander SJ , Yoshicedo J , Wright L , Odani J , Shrader T , Lee E , Lockhart SR , Ghai RR , Terio KA .
Vet Pathol 2024 3009858231225500 type
Clinical and laboratory findings of the first imported case of Middle East respiratory syndrome coronavirus to the United States.
Kapoor M , Pringle K , Kumar A , Dearth S , Liu L , Lovchik J , Perez O , Pontones P , Richards S , Yeadon-Fagbohun J , Breakwell L , Chea N , Cohen NJ , Schneider E , Erdman D , Haynes L , Pallansch M , Tao Y , Tong S , Gerber S , Swerdlow D , Feikin DR .
Clin Infect Dis 2014 59 (11) 1511-8
Targeted amplification and genetic sequencing of the severe acute respiratory syndrome coronavirus 2 surface glycoprotein
Keller MW , Keong LM , Rambo-Martin BL , Hassell N , Lacek KA , Wilson MM , Kirby MK , Liddell J , Owuor DC , Sheth M , Madden J , Lee JS , Kondor RJ , Wentworth DE , Barnes JR .
Microbiol Spectr 2023 e0298223 type
Previous infection and effectiveness of COVID-19 vaccination in middle- and high-school students
Almendares OM , Ruffin JD , Collingwood AH , Nolen LD , Lanier WA , Dash SR , Ciesla AA , Wiegand R , Tate JE , Kirking HL .
Pediatrics 2023 152 (6)
Effectiveness of the original monovalent coronavirus disease 2019 vaccines in preventing emergency department or urgent care encounters and hospitalizations among adults with disabilities: VISION Network, June 2021-September 2022
Patel P , Schrader KE , Rice CE , Rowley E , Cree RA , DeSilva MB , Embi PJ , Gaglani M , Grannis SJ , Ong TC , Stenehjem E , Naleway AL , Ball S , Natarajan K , Klein NP , Adams K , Kharbanda A , Ray C , Link-Gelles R , Tenforde MW .
Open Forum Infect Dis 2023 10 (11) ofad474 type
Pre-Delta, Delta, and Omicron periods of the coronavirus disease 2019 (COVID-19) pandemic and health outcomes during delivery hospitalization
Carlson J , Simeone RM , Ellington S , Galang R , DeSisto CL , Fleming-Dutra K , Riley L , Meaney-Delman D , Tong VT .
Obstet Gynecol 2023 143 (1) 131-138
Structural basis of the American mink ACE2 binding by Y453F trimeric spike glycoproteins of SARS-CoV-2
Ahn H , Calderon BM , Fan X , Gao Y , Horgan NL , Jiang N , Blohm DS , Hossain J , Rayyan NWK , Osman SH , Lin X , Currier M , Steel J , Wentworth DE , Zhou B , Liang B .
J Med Virol 2023 95 (10) e29163
Effectiveness of a messenger RNA vaccine booster dose against coronavirus disease 2019 among US healthcare personnel, October 2021-July 2022
Plumb ID , Mohr NM , Hagen M , Wiegand R , Dumyati G , Harland KK , Krishnadasan A , Gist JJ , Abedi G , Fleming-Dutra KE , Chea N , Lee J , Barter D , Brackney M , Fridkin SK , Wilson LE , Lovett SA , Ocampo V , Phipps EC , Marcus TM , Smithline HA , Hou PC , Lee LC , Moran GJ , Krebs E , Steele MT , Lim SC , Schrading WA , Chinnock B , Beiser DG , Faine B , Haran JP , Nandi U , Chipman AK , LoVecchio F , Talan DA , Pilishvili T .
Open Forum Infect Dis 2023 10 (10) ofad457 type
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