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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 30, 2024. (Total: 6327 publications)
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Records 1-30 (of 50 Records)
Query Trace: Collins J[original query]
The TIRS trial: Enrollment procedures and baseline characterization of a pediatric cohort to quantify the epidemiologic impact of targeted indoor residual spraying on Aedes-borne viruses in Merida, Mexico
Earnest JT , Kirstein OD , Mendoza AC , Barrera-Fuentes GA , Puerta-Guardo H , Parra-Cardeña M , Yam-Trujillo K , Collins MH , Pavia-Ruz N , Ayora-Talavera G , Gonzalez-Olvera G , Medina-Barreiro A , Bibiano-Marin W , Lenhart A , Halloran ME , Longini I , Dean N , Waller LA , Crisp AM , Correa-Morales F , Palacio-Vargas J , Granja-Perez P , Villanueva S , Delfın-Gonzalez H , Gomez-Dantes H , Manrique-Saide P , Vazquez-Prokopec GM .
PLoS One 2024 19 (9) e0310480
Detection of a human adenovirus outbreak, including some critical infections, using multipathogen testing at a large university, September 2022-January 2023
Montgomery JP , Marquez JL , Nord J , Stamper AR , Edwards EA , Valentini N , Frank CJ , Washer LL , Ernst RD , Park JI , Price D , Collins J , Smith-jeffcoat sE , Hu f , Knox cL , Khan r , Lu x , Kirking hL , Hsu cH .
Open Forum Infect Dis 2024 11 (5) ofae192 type
Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases.
Arias A , Watson SJ , Asogun D , Tobin EA , Lu J , Phan MVT , Jah U , Wadoum REG , Meredith L , Thorne L , Caddy S , Tarawalie A , Langat P , Dudas G , Faria NR , Dellicour S , Kamara A , Kargbo B , Kamara BO , Gevao S , Cooper D , Newport M , Horby P , Dunning J , Sahr F , Brooks T , Simpson AJH , Groppelli E , Liu G , Mulakken N , Rhodes K , Akpablie J , Yoti Z , Lamunu M , Vitto E , Otim P , Owilli C , Boateng I , Okoror L , Omomoh E , Oyakhilome J , Omiunu R , Yemisis I , Adomeh D , Ehikhiametalor S , Akhilomen P , Aire C , Kurth A , Cook N , Baumann J , Gabriel M , Wölfel R , Di Caro A , Carroll MW , Günther S , Redd J , Naidoo D , Pybus OG , Rambaut A , Kellam P , Goodfellow I , Cotten M .
Virus Evol 2016 2 (1) vew016
Epidemiologic and genomic evidence for zoonotic transmission of SARS-CoV-2 among people and animals on a Michigan mink farm, United States, 2020
Ghai RR , Straily A , Wineland N , Calogero J , Stobierski MG , Signs K , Blievernicht M , Torres-Mendoza Y , Waltenburg MA , Condrey JA , Blankenship HM , Riner D , Barr N , Schalow M , Goodrich J , Collins C , Ahmad A , Metz JM , Herzegh O , Straka K , Arsnoe DM , Duffiney AG , Shriner SA , Kainulainen MH , Carpenter A , Whitehill F , Wendling NM , Stoddard RA , Retchless AC , Uehara A , Tao Y , Li Y , Zhang J , Tong S , Barton Behravesh C .
Viruses 2023 15 (12) type
Investigation of A SARS-CoV-2 Delta (B.1.617.2) Variant Outbreak Among Residents of a Skilled Nursing Facility and Vaccine Effectiveness Analysis - Maricopa County, Arizona, June-July 2021.
Dale AP , Almendares O , Howard B , Burnett E , Prasai S , Arons M , Collins J , Duffy N , Pandit U , Brady S , White J , Garrett B , Kirking HL , Sunenshine R , Tate JE , Scott SE .
Clin Infect Dis 2022 75 (1) e20-e26
Culture-Independent Detection of Poliovirus in Stool Samples by Direct RNA Extraction.
Harrington C , Sun H , Jeffries-Miles S , Gerloff N , Mandelbaum M , Pang H , Collins N , Burns CC , Vega E .
Microbiol Spectr 2021 9 (3) e0066821 type
Direct detection of polioviruses using a recombinant poliovirus receptor.
Gerloff N , Mandelbaum M , Pang H , Collins N , Brown B , Sun H , Harrington C , Hecker J , Agha C , Burns CC , Vega E .
PLoS One 2021 16 (11) e0259099 type
Azithromycin and Ciprofloxacin Treatment Outcomes During an Outbreak of Multidrug-Resistant Shigella sonnei Infections in a Retirement Community-Vermont, 2018.
Gharpure R , Friedman CR , Fialkowski V , Collins JP , Strysko J , Marsh ZA , Chen JC , Meservey EH , Adediran AA , Schroeder MN , Wadhwa A , Fullerton KE , Watkins LF .
Clin Infect Dis 2021 74 (3) 455-460
Antimicrobial Resistance Creates Threat to Chimpanzee Health and Conservation in the Wild.
Parsons MB , Travis DA , Lonsdorf EV , Lipende I , Elchoufi D , Gilagiza B , Collins A , Kamenya S , Tauxe RV , Gillespie TR .
Pathogens 2021 10 (4)
Characterization of Pyrethroid Resistance Mechanisms in Aedes aegypti from the Florida Keys.
Scott ML , Hribar LJ , Leal AL , McAllister JC .
Am J Trop Med Hyg 2021 104 (3) 1111-1122
Anopheles gambiae (s.l.) is found where few are looking: assessing mosquito diversity and density outside inhabited areas using diverse sampling methods.
Epopa PS , Millogo AA , Collins CM , North AR , Benedict MQ , Tripet F , OʼLoughlin S , Dabiré RK , Ouédraogo GA , Diabaté A .
Parasit Vectors 2020 13 (1) 516
Comparison of A(H3N2) neutralizing antibody responses elicited by 2018-2019 season quadrivalent influenza vaccines derived from eggs, cells, and recombinant hemagglutinin.
Wang W , Alvarado-Facundo E , Vassell R , Collins L , Colombo RE , Ganesan A , Geaney C , Hrncir D , Lalani T , Markelz AE , Maves RC , McClenathan B , Mende K , Richard SA , Schofield C , Seshadri S , Spooner C , Utz GC , Warkentien TE , Levine M , Coles CL , Burgess TH , Eichelberger M , Weiss CD .
Clin Infect Dis 2020 73 (11) e4312-e4320
Vaccine effectiveness on DNA prevalence of human papillomavirus infection in anal and oral specimens from men who have sex with men- United States, 2016-2018.
Meites E , Winer RL , Newcomb ME , Gorbach PM , Querec TD , Rudd J , Collins T , Lin J , Moore J , Remble T , Swanson F , Franz J , Bolan RK , Golden MR , Mustanski B , Crosby RA , Unger ER , Markowitz LE .
J Infect Dis 2020 222 (12) 2052-2060
Shigella sonnei Outbreak Investigation During a Municipal Water Crisis-Genesee and Saginaw Counties, Michigan, 2016.
McClung RP , Karwowski M , Castillo C , McFadden J , Collier S , Collins J , Soehnlen M , Dietrich S , Trees E , Wilt G , Harrington C , Miller A , Adam E , Reses H , Cope J , Fullerton K , Hill V , Yoder J .
Am J Public Health 2020 110 (6) e1-e8 type
Virus-Host Interactions Between Nonsecretors and Human Norovirus.
Lindesmith LC , Brewer-Jensen PD , Mallory ML , Jensen K , Yount BL , Costantini V , Collins MH , Edwards CE , Sheahan TP , Vinje J , Baric RS .
Cell Mol Gastroenterol Hepatol 2020 10 (2) 245-267
Genetic characterization of influenza A(H3N2) viruses circulating in coastal Kenya, 2009-2017.
Owuor DC , Ngoi JM , Otieno JR , Otieno GP , Nyasimi FM , Nyiro JU , Agoti CN , Chaves SS , Nokes DJ .
Influenza Other Respir Viruses 2020 14 (3) 320-330 type
Invasive Nontypeable Haemophilus influenzae Infection Among Adults With HIV in Metropolitan Atlanta, Georgia, 2008-2018.
Collins LF , Havers FP , Tunali A , Thomas S , Clennon JA , Wiley Z , Tobin-D'Angelo M , Parrott T , Read TD , Satola SW , Petit RA3rd , Farley MM .
JAMA 2019 322 (24) 2399-2410 type
A New Solid Matrix for Preservation of Viral Nucleic Acid from Clinical Specimens at Ambient Temperature.
Cromeans T , Jothikumar N , Lee J , Collins N , Burns CC , Hill VR , Vinje J .
J Virol Methods 2019 274 113732 type
The relationship between insecticide resistance, mosquito age and malaria prevalence in Anopheles gambiae s.l. from Guinea.
Collins E , Vaselli NM , Sylla M , Beavogui AH , Orsborne J , Lawrence G , Wiegand RE , Irish SR , Walker T , Messenger LA .
Sci Rep 2019 9 (1) 8846 type
Notes from the Field: Outbreak of Multidrug-Resistant Shigella sonnei Infections in a Retirement Community - Vermont, October-November 2018.
Strysko J , Fialkowski V , Marsh Z , Wadhwa A , Collins J , Gharpure R , Kelso P , Friedman CR , Fullerton KE .
MMWR Morb Mortal Wkly Rep 2019 68 (17) 405-406 type
Large-cage assessment of a transgenic sex-ratio distortion strain on populations of an African malaria vector.
Facchinelli L , North AR , Collins CM , Menichelli M , Persampieri T , Bucci A , Spaccapelo R , Crisanti A , Benedict MQ .
Parasit Vectors 2019 12 (1) 70
Salmonella enterica Serotype Javiana Infections Linked to a Seafood Restaurant in Maricopa County, Arizona, 2016.
Venkat H , Matthews J , Lumadao P , Caballero B , Collins J , Fowle N , Kellis M , Tewell M , White S , Hassan R , Classon A , Joung Y , Komatsu K , Weiss J , Zusy S , Sunenshine R .
J Food Prot 2018 81 (8) 1283-1292
Strategic Response to an Outbreak of Circulating Vaccine-Derived Poliovirus Type 2 - Syria, 2017-2018.
Mbaeyi C , Wadood ZM , Moran T , Ather F , Stehling-Ariza T , Nikulin J , Al Safadi M , Iber J , Zomahoun L , Abourshaid N , Pang H , Collins N , Asghar H , Butt OUI , Burns CC , Ehrhardt D , Sharaf M .
MMWR Morb Mortal Wkly Rep 2018 67 (24) 690-694 type
Taxonomy of the order Mononegavirales: update 2018.
Amarasinghe GK , Arechiga Ceballos NG , Banyard AC , Basler CF , Bavari S , Bennett AJ , Blasdell KR , Briese T , Bukreyev A , Cai Y , Calisher CH , Campos Lawson C , Chandran K , Chapman CA , Chiu CY , Choi KS , Collins PL , Dietzgen RG , Dolja VV , Dolnik O , Domier LL , Durrwald R , Dye JM , Easton AJ , Ebihara H , Echevarria JE , Fooks AR , Formenty PBH , Fouchier RAM , Freuling CM , Ghedin E , Goldberg TL , Hewson R , Horie M , Hyndman TH , Jiang D , Kityo R , Kobinger GP , Kondo H , Koonin EV , Krupovic M , Kurath G , Lamb RA , Lee B , Leroy EM , Maes P , Maisner A , Marston DA , Mor SK , Muller T , Muhlberger E , Ramirez VMN , Netesov SV , Ng TFF , Nowotny N , Palacios G , Patterson JL , Paweska JT , Payne SL , Prieto K , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Siddell S , Smither SJ , Song Q , Song T , Stenglein MD , Stone DM , Takada A , Tesh RB , Thomazelli LM , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Vazquez-Moron S , Verdugo C , Volchkov VE , Wahl V , Walker PJ , Wang D , Wang LF , Wellehan JFX , Wiley MR , Whitfield AE , Wolf YI , Ye G , Zhang YZ , Kuhn JH .
Arch Virol 2018 163 (8) 2283-2294
Near-Complete Genome Sequences of Several New Norovirus Genogroup II Genotypes.
Chhabra P , Aswath K , Collins N , Ahmed T , Olortegui MP , Kosek M , Cebelinski E , Cooper PJ , Bucardo F , Lopez MR , Castro CJ , Marine RL , Ng TFF , Vinje J .
Genome Announc 2018 6 (6)
Problems of classification in the family Paramyxoviridae.
Rima B , Collins P , Easton A , Fouchier R , Kurath G , Lamb RA , Lee B , Maisner A , Rota P , Wang LF .
Arch Virol 2018 163 (5) 1395-1404
Genetic and Epidemiologic Trends of Norovirus Outbreaks in the US Demonstrated Emergence of Novel GII.4 Recombinant Viruses, 2013-2016.
Cannon JL , Barclay L , Collins NR , Wikswo ME , Castro CJ , Magana LC , Gregoricus N , Marine RL , Chhabra P , Vinje J .
J Clin Microbiol 2017 55 (7) 2208-2221
Taxonomy of the order Mononegavirales: update 2017.
Amarasinghe GK , Bao Y , Basler CF , Bavari S , Beer M , Bejerman N , Blasdell KR , Bochnowski A , Briese T , Bukreyev A , Calisher CH , Chandran K , Collins PL , Dietzgen RG , Dolnik O , Durrwald R , Dye JM , Easton AJ , Ebihara H , Fang Q , Formenty P , Fouchier RA , Ghedin E , Harding RM , Hewson R , Higgins CM , Hong J , Horie M , James AP , Jiang D , Kobinger GP , Kondo H , Kurath G , Lamb RA , Lee B , Leroy EM , Li M , Maisner A , Muhlberger E , Netesov SV , Nowotny N , Patterson JL , Payne SL , Paweska JT , Pearson MN , Randall RE , Revill PA , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Smither SJ , Song Q , Stone DM , Takada A , Terregino C , Tesh RB , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Volchkov VE , Wahl-Jensen V , Walker PJ , Wang B , Wang D , Wang F , Wang LF , Werren JH , Whitfield AE , Yan Z , Ye G , Kuhn JH .
Arch Virol 2017 162 (8) 2493-2504
Genomic Characterization of Three Melon Necrotic Spot Viruses Detected in Human Stool Specimens.
Marine R , Castro C , Magana L , Ng TF , Aswath K , Collins N , Park GW , Vinje J , Oberste MS .
Genome Announc 2017 5 (11)
Plasmodium Parasitemia Associated With Increased Survival in Ebola Virus-Infected Patients.
Rosenke K , Adjemian J , Munster VJ , Marzi A , Falzarano D , Onyango CO , Ochieng M , Juma B , Fischer RJ , Prescott JB , Safronetz D , Omballa V , Owuor C , Hoenen T , Groseth A , Martellaro C , van Doremalen N , Zemtsova G , Self J , Bushmaker T , McNally K , Rowe T , Emery SL , Feldmann F , Williamson BN , Best SM , Nyenswah TG , Grolla A , Strong JE , Kobinger G , Bolay FK , Zoon KC , Stassijns J , Giuliani R , de Smet M , Nichol ST , Fields B , Sprecher A , Massaquoi M , Feldmann H , de Wit E .
Clin Infect Dis 2016 63 (8) 1026-33
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