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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Oct 07, 2024. (Total: 6342 publications)
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Records 1-30 (of 115 Records)
Query Trace: Charles J[original query]
Challenges and approaches to establishing multi-pathogen serosurveillance: Findings from the 2023 serosurveillance summit
Carcelen AC , Kong AC , Takahashi S , Hegde S , Jaenisch T , Chu M , Rochford R , Kostandova N , Gurley ES , Wesolowski A , Azman AS , van der Klis FRM , den Hartog G , Drakeley C , Heaney C , Winter AK , Salje H , Rodriguez-Barraquer I , Leung DT , Njenga SM , Kagucia EW , Jambo KC , Wolter N , Charles RC , Saboyá-Díaz MI , Martin DL , Moss WJ .
Am J Trop Med Hyg 2024 type
Extensively drug-resistant pseudomonas aeruginosa outbreak associated with artificial tears
Grossman MK , Rankin DA , Maloney M , Stanton RA , Gable P , Stevens VA , Ewing T , Saunders K , Kogut S , Nazarian E , Bhaurla S , Mephors J , Mongillo J , Stonehocker S , Prignano J , Valencia N , Charles A , McNamara K , Fritsch WA , Ruelle S , Plucinski CA , Sosa L , Ostrowsky B , Ham DC , Walters MS .
Clin Infect Dis 2024 type
Heavy metals, organic solvents, and multiple sclerosis: An exploratory look at gene-environment interactions.
Napier MD , Poole C , Satten GA , Ashley-Koch A , Marrie RA , Williamson DM .
Arch Environ Occup Health 2016 71 (1) 26-34
Notes from the field: Nontuberculous mycobacteria infections after cosmetic surgery procedures in Florida - nine states, 2022-2023
Saunders KE , Reyes JM , Cyril L , Mitchell M , Colter S , Erskine J , McNamara KX , Hunter JC , Perkins KM , Charles A .
MMWR Morb Mortal Wkly Rep 2024 73 (3) 66-67 type
Cryptic transmission of SARS-CoV-2 in Washington State.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin J , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR .
medRxiv 2020 type
The host range restriction of bat-associated no-known-vector flaviviruses occurs post-entry.
Charles J , Tangudu CS , Nunez-Avellaneda D , Brault AC , Blitvich BJ .
J Gen Virol 2021 102 (9)
Proposal for Human Respiratory Syncytial Virus Nomenclature below the Species Level.
Salimi V , Viegas M , Trento A , Agoti CN , Anderson LJ , Avadhanula V , Bahl J , Bont L , Brister JR , Cane PA , Galiano M , Graham BS , Hatcher EL , Hellferscee O , Henke DM , Hirve S , Jackson S , Keyaerts E , Kragten-Tabatabaie L , Lindstrom S , Nauwelaers I , Nokes DJ , Openshaw PJ , Peret TC , Piedra PA , Ramaekers K , Rector A , Trovão NS , von Gottberg A , Zambon M , Zhang W , Williams TC , Barr IG , Buchholz UJ .
Emerg Infect Dis 2021 27 (6) 1-9 type
CATMoS: Collaborative Acute Toxicity Modeling Suite.
Mansouri K , Karmaus AL , Fitzpatrick J , Patlewicz G , Pradeep P , Alberga D , Alepee N , Allen TEH , Allen D , Alves VM , Andrade CH , Auernhammer TR , Ballabio D , Bell S , Benfenati E , Bhattacharya S , Bastos JV , Boyd S , Brown JB , Capuzzi SJ , Chushak Y , Ciallella H , Clark AM , Consonni V , Daga PR , Ekins S , Farag S , Fedorov M , Fourches D , Gadaleta D , Gao F , Gearhart JM , Goh G , Goodman JM , Grisoni F , Grulke CM , Hartung T , Hirn M , Karpov P , Korotcov A , Lavado GJ , Lawless M , Li X , Luechtefeld T , Lunghini F , Mangiatordi GF , Marcou G , Marsh D , Martin T , Mauri A , Muratov EN , Myatt GJ , Nguyen DT , Nicolotti O , Note R , Pande P , Parks AK , Peryea T , Polash AH , Rallo R , Roncaglioni A , Rowlands C , Ruiz P , Russo DP , Sayed A , Sayre R , Sheils T , Siegel C , Silva AC , Simeonov A , Sosnin S , Southall N , Strickland J , Tang Y , Teppen B , Tetko IV , Thomas D , Tkachenko V , Todeschini R , Toma C , Tripodi I , Trisciuzzi D , Tropsha A , Varnek A , Vukovic K , Wang Z , Wang L , Waters KM , Wedlake AJ , Wijeyesakere SJ , Wilson D , Xiao Z , Yang H , Zahoranszky-Kohalmi G , Zakharov AV , Zhang FF , Zhang Z , Zhao T , Zhu H , Zorn KM , Casey W , Kleinstreuer NC .
Environ Health Perspect 2021 129 (4) 47013
Introduction, Transmission Dynamics, and Fate of Early SARS-CoV-2 Lineages in Santa Clara County, California.
Villarino E , Deng X , Kemper CA , Jorden MA , Bonin B , Rudman SL , Han GS , Yu G , Wang C , Federman S , Bushnell B , Wadford DA , Lin W , Tao Y , Paden CR , Bhatnagar J , MacCannell T , Tong S , Batson J , Chiu CY .
J Infect Dis 2021 224 (2) 207-217 type
Under pressure: phenotypic divergence and convergence associated with microhabitat adaptations in Triatominae.
Abad-Franch F , Monteiro FA , Pavan MG , Patterson JS , Bargues MD , Zuriaga MÁ , Aguilar M , Beard CB , Mas-Coma S , Miles MA .
Parasit Vectors 2021 14 (1) 195 type
Chimeric Zika viruses containing structural protein genes of insect-specific flaviviruses cannot replicate in vertebrate cells due to entry and post-translational restrictions.
Tangudu CS , Charles J , Nunez-Avellaneda D , Hargett AM , Brault AC , Blitvich BJ .
Virology 2021 559 30-39 type
Regional Consortia : A Framework for Public Health Laboratory Collaboration and Service Sharing.
Ned-Sykes RM , Pentella M , Kurimski L , Zanto S , Matt Charles E , Bean C , Gibson D , Breckenridge K , Su B , Ridderhof J .
Public Health Rep 2021 137 (2) 333549211002774 type
Performance of a fully-automated system on a WHO malaria microscopy evaluation slide set.
Horning MP , Delahunt CB , Bachman CM , Luchavez J , Luna C , Hu L , Jaiswal MS , Thompson CM , Kulhare S , Janko S , Wilson BK , Ostbye T , Mehanian M , Gebrehiwot R , Yun G , Bell D , Proux S , Carter JY , Oyibo W , Gamboa D , Dhorda M , Vongpromek R , Chiodini PL , Ogutu B , Long EG , Tun K , Burkot TR , Lilley K , Mehanian C .
Malar J 2021 20 (1) 110
Trends in Hepatocellular Carcinoma Incidence and Risk Among Persons With HIV in the US and Canada, 1996-2015.
Sun J , Althoff KN , Jing Y , Horberg MA , Buchacz K , Gill MJ , Justice AC , Rabkin CS , Goedert JJ , Sigel K , Cachay E , Park L , Lim JK , Kim HN , Lo Re V 3rd , Moore R , Sterling T , Peters MG , Achenbach CJ , Silverberg M , Thorne JE , Mayor AM , Crane HM , Kitahata MM , Klein M , Kirk GD .
JAMA Netw Open 2021 4 (2) e2037512
Auto-antibodies to type I IFNs can underlie adverse reactions to yellow fever live attenuated vaccine.
Bastard P , Michailidis E , Hoffmann HH , Chbihi M , Le Voyer T , Rosain J , Philippot Q , Seeleuthner Y , Gervais A , Materna M , de Oliveira PMN , Maia MLS , Dinis Ano Bom AP , Azamor T , Araújo da Conceição D , Goudouris E , Homma A , Slesak G , Schäfer J , Pulendran B , Miller JD , Huits R , Yang R , Rosen LB , Bizien L , Lorenzo L , Chrabieh M , Erazo LV , Rozenberg F , Jeljeli MM , Béziat V , Holland SM , Cobat A , Notarangelo LD , Su HC , Ahmed R , Puel A , Zhang SY , Abel L , Seligman SJ , Zhang Q , MacDonald MR , Jouanguy E , Rice CM , Casanova JL .
J Exp Med 2021 218 (4) type
Cost-effectiveness of implementing 13-valent pneumococcal conjugate vaccine for U.S. adults aged 19 years and older with underlying conditions.
Kobayashi M , Stoecker C , Xing W , Cho BH , Pilishvili T .
Hum Vaccin Immunother 2021 17 (7) 1-9
Fatal Case of Chronic Jamestown Canyon Virus Encephalitis Diagnosed by Metagenomic Sequencing in Patient Receiving Rituximab.
Solomon IH , Ganesh VS , Yu G , Deng XD , Wilson MR , Miller S , Milligan TA , Mukerji SS , Mathewson A , Linxweiler J , Morse D , Ritter JM , Staples JE , Hughes H , Gould CV , Sabeti PC , Chiu CY , Piantadosi A .
Emerg Infect Dis 2021 27 (1) 238-42
Towards Unified Data Exchange Formats for Reporting Molecular Drug Susceptibility Testing.
Bonney W , Price SF , Abhyankar S , Merrick R , Hampole V , Halse TA , DiDonato C , Dalton T , Metchock B , Starks AM , Miramontes R .
Online J Public Health Inform 2020 12 (2) e14 type
Timely Intervention and Control of a Novel Coronavirus (COVID-19) Outbreak at a Large Skilled Nursing Facility - San Francisco, California, 2020.
Karmarkar E , Blanco I , Amornkul P , DuBois A , Deng X , Moonan PK , Rubenstein BL , Miller DA , Kennedy I , Yu J , Dauterman J , Ongpin M , Hathaway W , Hoo L , Trammell S , Ememu E , Yu G , Khwaja Z , Lu W , Talai N , Jain S , Louie J , Philip S , Federman S , Masinde G , Wadford DA , Bobba N , Stoltey J , Smith A , Epson E , Chiu C , Bennett A , Vasquez AM , Williams T .
Infect Control Hosp Epidemiol 2020 42 (10) 1-20 type
Multiple Introductions and Predominance of Rotavirus Group A Genotype G3P[8] in Kilifi, Coastal Kenya, 4 Years after Nationwide Vaccine Introduction.
Mwanga MJ , Verani JR , Omore R , Tate JE , Parashar UD , Murunga N , Gicheru E , Breiman RF , Nokes DJ , Agoti CN .
Pathogens 2020 9 (12) type
Trends in County-Level COVID-19 Incidence in Counties With and Without a Mask Mandate - Kansas, June 1-August 23, 2020.
Van Dyke ME , Rogers TM , Pevzner E , Satterwhite CL , Shah HB , Beckman WJ , Ahmed F , Hunt DC , Rule J .
MMWR Morb Mortal Wkly Rep 2020 69 (47) 1777-1781
Association Between Social Vulnerability and a County's Risk for Becoming a COVID-19 Hotspot - United States, June 1-July 25, 2020.
Dasgupta S , Bowen VB , Leidner A , Fletcher K , Musial T , Rose C , Cha A , Kang G , Dirlikov E , Pevzner E , Rose D , Ritchey MD , Villanueva J , Philip C , Liburd L , Oster AM .
MMWR Morb Mortal Wkly Rep 2020 69 (42) 1535-1541
Cryptic transmission of SARS-CoV-2 in Washington state.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Müller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin JS , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR .
Science 2020 370 (6516) 571-575 type
2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales.
Kuhn JH , Adkins S , Alioto D , Alkhovsky SV , Amarasinghe GK , Anthony SJ , Avšič-Županc T , Ayllón MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Bartonička T , Basler C , Bavari S , Beer M , Bente DA , Bergeron É , Bird BH , Blair C , Blasdell KR , Bradfute SB , Breyta R , Briese T , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Buzkan N , Calisher CH , Cao M , Casas I , Chamberlain J , Chandran K , Charrel RN , Chen B , Chiumenti M , Choi IR , Clegg JCS , Crozier I , da Graça JV , Dal Bó E , Dávila AMR , de la Torre JC , de Lamballerie X , de Swart RL , Di Bello PL , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Dolja VV , Dolnik O , Drebot MA , Drexler JF , Dürrwald R , Dufkova L , Dundon WG , Duprex WP , Dye JM , Easton AJ , Ebihara H , Elbeaino T , Ergünay K , Fernandes J , Fooks AR , Formenty PBH , Forth LF , Fouchier RAM , Freitas-Astúa J , Gago-Zachert S , Gāo GF , García ML , García-Sastre A , Garrison AR , Gbakima A , Goldstein T , Gonzalez JJ , Griffiths A , Groschup MH , Günther S , Guterres A , Hall RA , Hammond J , Hassan M , Hepojoki J , Hepojoki S , Hetzel U , Hewson R , Hoffmann B , Hongo S , Höper D , Horie M , Hughes HR , Hyndman TH , Jambai A , Jardim R , Jiāng D , Jin Q , Jonson GB , Junglen S , Karadağ S , Keller KE , Klempa B , Klingström J , Kobinger G , Kondō H , Koonin EV , Krupovic M , Kurath G , Kuzmin IV , Laenen L , Lamb RA , Lambert AJ , Langevin SL , Lee B , Lemos ERS , Leroy EM , Li D , Lǐ J , Liang M , Liú W , Liú Y , Lukashevich IS , Maes P , Marciel de Souza W , Marklewitz M , Marshall SH , Martelli GP , Martin RR , Marzano SL , Massart S , McCauley JW , Mielke-Ehret N , Minafra A , Minutolo M , Mirazimi A , Mühlbach HP , Mühlberger E , Naidu R , Natsuaki T , Navarro B , Navarro JA , Netesov SV , Neumann G , Nowotny N , Nunes MRT , Nylund A , Økland AL , Oliveira RC , Palacios G , Pallas V , Pályi B , Papa A , Parrish CR , Pauvolid-Corrêa A , Pawęska JT , Payne S , Pérez DR , Pfaff F , Radoshitzky SR , Rahman AU , Ramos-González PL , Resende RO , Reyes CA , Rima BK , Romanowski V , Robles Luna G , Rota P , Rubbenstroth D , Runstadler JA , Ruzek D , Sabanadzovic S , Salát J , Sall AA , Salvato MS , Sarpkaya K , Sasaya T , Schwemmle M , Shabbir MZ , Shí X , Shí Z , Shirako Y , Simmonds P , Širmarová J , Sironi M , Smither S , Smura T , Song JW , Spann KM , Spengler JR , Stenglein MD , Stone DM , Straková P , Takada A , Tesh RB , Thornburg NJ , Tomonaga K , Tordo N , Towner JS , Turina M , Tzanetakis I , Ulrich RG , Vaira AM , van den Hoogen B , Varsani A , Vasilakis N , Verbeek M , Wahl V , Walker PJ , Wang H , Wang J , Wang X , Wang LF , Wèi T , Wells H , Whitfield AE , Williams JV , Wolf YI , Wú Z , Yang X , Yáng X , Yu X , Yutin N , Zerbini FM , Zhang T , Zhang YZ , Zhou G , Zhou X .
Arch Virol 2020 165 (12) 3023-3072
Possibility for reverse zoonotic transmission of SARS-CoV-2 to free-ranging wildlife: A case study of bats.
Olival KJ , Cryan PM , Amman BR , Baric RS , Blehert DS , Brook CE , Calisher CH , Castle KT , Coleman JTH , Daszak P , Epstein JH , Field H , Frick WF , Gilbert AT , Hayman DTS , Ip HS , Karesh WB , Johnson CK , Kading RC , Kingston T , Lorch JM , Mendenhall IH , Peel AJ , Phelps KL , Plowright RK , Reeder DM , Reichard JD , Sleeman JM , Streicker DG , Towner JS , Wang LF .
PLoS Pathog 2020 16 (9) e1008758 type
STROBE-metagenomics: a STROBE extension statement to guide the reporting of metagenomics studies.
Bharucha T , Oeser C , Balloux F , Brown JR , Carbo EC , Charlett A , Chiu CY , Claas ECJ , de Goffau MC , de Vries JJC , Eloit M , Hopkins S , Huggett JF , MacCannell D , Morfopoulou S , Nath A , O'Sullivan DM , Reoma LB , Shaw LP , Sidorov I , Simner PJ , Van Tan L , Thomson EC , van Dorp L , Wilson MR , Breuer J , Field N .
Lancet Infect Dis 2020 20 (10) e251-e260 type
Rotavirus group A genotype circulation patterns across Kenya before and after nationwide vaccine introduction, 2010-2018.
Mwanga MJ , Owor BE , Ochieng JB , Ngama MH , Ogwel B , Onyango C , Juma J , Njeru R , Gicheru E , Otieno GP , Khagayi S , Agoti CN , Bigogo GM , Omore R , Addo OY , Mapaseka S , Tate JE , Parashar UD , Hunsperger E , Verani JR , Breiman RF , Nokes DJ .
BMC Infect Dis 2020 20 (1) 504 type
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California.
Deng X , Gu W , Federman S , du Plessis L , Pybus OG , Faria N , Wang C , Yu G , Bushnell B , Pan CY , Guevara H , Sotomayor-Gonzalez A , Zorn K , Gopez A , Servellita V , Hsu E , Miller S , Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Chu HY , Shendure J , Jerome KR , Anderson C , Gangavarapu K , Zeller M , Spencer E , Andersen KG , MacCannell D , Paden CR , Li Y , Zhang J , Tong S , Armstrong G , Morrow S , Willis M , Matyas BT , Mase S , Kasirye O , Park M , Masinde G , Chan C , Yu AT , Chai SJ , Villarino E , Bonin B , Wadford DA , Chiu CY .
Science 2020 369 (6503) 582-587
Public Health Responses to COVID-19 Outbreaks on Cruise Ships - Worldwide, February-March 2020.
Moriarty LF , Plucinski MM , Marston BJ , Kurbatova EV , Knust B , Murray EL , Pesik N , Rose D , Fitter D , Kobayashi M , Toda M , Canty PT , Scheuer T , Halsey ES , Cohen NJ , Stockman L , Wadford DA , Medley AM , Green G , Regan JJ , Tardivel K , White S , Brown C , Morales C , Yen C , Wittry B , Freeland A , Naramore S , Novak RT , Daigle D , Weinberg M , Acosta A , Herzig C , Kapella BK , Jacobson KR , Lamba K , Ishizumi A , Sarisky J , Svendsen E , Blocher T , Wu C , Charles J , Wagner R , Stewart A , Mead PS , Kurylo E , Campbell S , Murray R , Weidle P , Cetron M , Friedman CR .
MMWR Morb Mortal Wkly Rep 2020 69 (12) 347-352 type
Genetic characterization of influenza A(H3N2) viruses circulating in coastal Kenya, 2009-2017.
Owuor DC , Ngoi JM , Otieno JR , Otieno GP , Nyasimi FM , Nyiro JU , Agoti CN , Chaves SS , Nokes DJ .
Influenza Other Respir Viruses 2020 14 (3) 320-330 type
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