CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Sep 25, 2023. (Total: 4416 publications since 2011)

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Records 1-16 (of 16 Records)

Query Trace: Carleton HA[original query]
Predicting food sources of Listeria monocytogenes based on genomic profiling using random forest model Gu W , Cui Z , Stroika S , Carleton HA , Conrad A , Katz LS , Richardson LC , Hunter J , Click ES , Bruce BB . Foodborne Pathog Dis 2023
Evaluation of core genome and whole genome multilocus sequence typing schemes for Campylobacter jejuni and Campylobacter coli outbreak detection in the USA Joseph LA , Griswold T , Vidyaprakash E , Im SB , Williams GM , Pouseele HA , Hise KB , Carleton HA . Microb Genom 2023 9 (5)
Cronobacter sakazakii Infections in Two Infants Linked to Powdered Infant Formula and Breast Pump Equipment - United States, 2021 and 2022. Haston JC , Miko S , Cope JR , McKeel H , Walters C , Joseph LA , Griswold T , Katz LS , Andjar AA , Tourdot L , Rounds J , Vagnone P , Medus C , Harris J , Geist R , Neises D , Wiggington A , Smith T , Im MS , Wheeler C , Smith P , Carleton HA , Lee CC . MMWR Morb Mortal Wkly Rep 2023 72 (9) 223-226
Genome Sequences from a Reemergence of Vibrio cholerae in Haiti, 2022 Reveal Relatedness to Previously Circulating Strains. Walters C , Chen J , Stroika S , Katz LS , Turnsek M , Compre V , Im MS , Gomez S , McCullough A , Landaverde C , Putney J , Caidi H , Folster J , Carleton HA , Boncy J , Lee CC . J Clin Microbiol 2023 e0014223
Molecular characterization of circulating Salmonella Typhi strains in an urban informal settlement in Kenya. Ochieng C , Chen JC , Osita MP , Katz LS , Griswold T , Omballa V , Ng'eno E , Ouma A , Wamola N , Opiyo C , Achieng L , Munywoki PK , Hendriksen RS , Freeman M , Mikoleit M , Juma B , Bigogo G , Mintz E , Verani JR , Hunsperger E , Carleton HA . PLoS Negl Trop Dis 2022 16 (8) e0010704
The power, potential, benefits, and challenges of implementing high-throughput sequencing in food safety systems. Imanian B , Donaghy J , Jackson T , Gummalla S , Ganesan B , Baker RC , Henderson M , Butler EK , Hong Y , Ring B , Thorp C , Khaksar R , Samadpour M , Lawless KA , MacLaren-Lee I , Carleton HA , Tian R , Zhang W , Wan J . NPJ Sci Food 2022 6 (1) 35
The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States. Stevens EL , Carleton HA , Beal J , Tillman GE , Lindsey RL , Lauer AC , Pightling A , Jarvis KG , Ottesen A , Ramachandran P , Hintz L , Katz LS , Folster JP , Whichard JM , Trees E , Timme RE , McDermott P , Wolpert B , Bazaco M , Zhao S , Lindley S , Bruce BB , Griffin PM , Brown E , Allard M , Tallent S , Irvin K , Hoffmann M , Wise M , Tauxe R , Gerner-Smidt P , Simmons M , Kissler B , Defibaugh-Chavez S , Klimke W , Agarwala R , Lindsay J , Cook K , Austerman SR , Goldman D , McGarry S , Hale KR , Dessai U , Musser SM , Braden C . J Food Prot 2022 85 (5) 755-772
Evaluating whole-genome sequencing quality metrics for enteric pathogen outbreaks. Wagner DD , Carleton HA , Trees E , Katz LS . PeerJ 2021 9 e12446
Comparison of Molecular Subtyping and Antimicrobial Resistance Detection Methods Used in a Large Multi-State Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Linked to Pet Store Puppies. Joseph LA , FrancoisWatkins LK , Chen J , Tagg KA , Bennett C , Caidi H , Folster JP , Laughlin ME , Koski L , Silver R , Stevenson L , Robertson S , Pruckler J , Nichols M , Pouseele H , Carleton HA , Basler C , Friedman CR , Geissler A , Hise KB , Aubert RD . J Clin Microbiol 2020 58 (10)
Pathogen Genomics in Public Health. Armstrong GL , MacCannell DR , Taylor J , Carleton HA , Neuhaus EB , Bradbury RS , Posey JE , Gwinn M . N Engl J Med 2019 381 (26) 2569-2580
Implications of Mobile Genetic Elements for Salmonella enterica Single-Nucleotide Polymorphism Subtyping and Source Tracking Investigations. Li S , Zhang S , Baert L , Jagadeesan B , Ngom-Bru C , Griswold T , Katz LS , Carleton HA , Deng X . Appl Environ Microbiol 2019 85 (24)
PulseNet and the Changing Paradigm of Laboratory-Based Surveillance for Foodborne Diseases. Kubota KA , Wolfgang WJ , Baker DJ , Boxrud D , Turner L , Trees E , Carleton HA , Gerner-Smidt P . Public Health Rep 2019 134 22s-28s
Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak Investigation. Besser JM , Carleton HA , Trees E , Stroika SG , Hise K , Wise M , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 504-512
Metagenomic Approaches for Public Health Surveillance of Foodborne Infections: Opportunities and Challenges. Carleton HA , Besser J , Williams-Newkirk AJ , Huang A , Trees E , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 474-479
Multistate outbreak of Salmonella Paratyphi B variant L(+) tartrate(+) and Salmonella Weltevreden infections linked to imported frozen raw tuna: USA, March-July 2015. Hassan R , Tecle S , Adcock B , Kellis M , Weiss J , Saupe A , Sorenson A , Klos R , Blankenship J , Blessington T , Whitlock L , Carleton HA , Concepcion-Acevedo J , Tolar B , Wise M , Neil KP . Epidemiol Infect 2018 146 (11) 1-7
An Assessment of Different Genomic Approaches for Inferring Phylogeny of Listeria monocytogenes. Henri C , Leekitcharoenphon P , Carleton HA , Radomski N , Kaas RS , Mariet JF , Felten A , Aarestrup FM , GernerSmidt P , Roussel S , Guillier L , Mistou MY , Hendriksen RS . Front Microbiol 2017 8 2351