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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)
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Records 1-25 (of 25 Records)
Query Trace: Biggerstaff M[original query]
Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty
Howerton E , Contamin L , Mullany LC , Qin M , Reich NG , Bents S , Borchering RK , Jung SM , Loo SL , Smith CP , Levander J , Kerr J , Espino J , van Panhuis WG , Hochheiser H , Galanti M , Yamana T , Pei S , Shaman J , Rainwater-Lovett K , Kinsey M , Tallaksen K , Wilson S , Shin L , Lemaitre JC , Kaminsky J , Hulse JD , Lee EC , McKee CD , Hill A , Karlen D , Chinazzi M , Davis JT , Mu K , Xiong X , Pastore YPiontti A , Vespignani A , Rosenstrom ET , Ivy JS , Mayorga ME , Swann JL , España G , Cavany S , Moore S , Perkins A , Hladish T , Pillai A , Ben Toh K , Longini I Jr , Chen S , Paul R , Janies D , Thill JC , Bouchnita A , Bi K , Lachmann M , Fox SJ , Meyers LA , Srivastava A , Porebski P , Venkatramanan S , Adiga A , Lewis B , Klahn B , Outten J , Hurt B , Chen J , Mortveit H , Wilson A , Marathe M , Hoops S , Bhattacharya P , Machi D , Cadwell BL , Healy JM , Slayton RB , Johansson MA , Biggerstaff M , Truelove S , Runge MC , Shea K , Viboud C , Lessler J .
Nat Commun 2023 14 (1) 7260
Effectiveness of self-collected, ambient temperature-preserved nasal swabs compared to samples collected by trained staff for genotyping of respiratory viruses by shotgun RNA sequencing: Comparative study
Soto R , Paul L , Porucznik CA , Xie H , Stinnett RC , Briggs B , Biggerstaff M , Stanford J , Schlaberg R .
JMIR Form Res 2023 7 e32848
Public health impact of the U.S. Scenario Modeling Hub
Borchering RK , Healy JM , Cadwell BL , Johansson MA , Slayton RB , Wallace M , Biggerstaff M .
Epidemics 2023 44 100705
Impact of SARS-CoV-2 vaccination of children ages 5-11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021-March 2022: A multi-model study.
Borchering RK , Mullany LC , Howerton E , Chinazzi M , Smith CP , Qin M , Reich NG , Contamin L , Levander J , Kerr J , Espino J , Hochheiser H , Lovett K , Kinsey M , Tallaksen K , Wilson S , Shin L , Lemaitre JC , Hulse JD , Kaminsky J , Lee EC , Hill AL , Davis JT , Mu K , Xiong X , Pastore YPionttiA , Vespignani A , Srivastava A , Porebski P , Venkatramanan S , Adiga A , Lewis B , Klahn B , Outten J , Hurt B , Chen J , Mortveit H , Wilson A , Marathe M , Hoops S , Bhattacharya P , Machi D , Chen S , Paul R , Janies D , Thill JC , Galanti M , Yamana T , Pei S , Shaman J , Espaa G , Cavany S , Moore S , Perkins A , Healy JM , Slayton RB , Johansson MA , Biggerstaff M , Shea K , Truelove SA , Runge MC , Viboud C , Lessler J .
Lancet Reg Health Am 2023 17 100398 type
Projected resurgence of COVID-19 in the United States in July-December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination.
Truelove S , Smith CP , Qin M , Mullany LC , Borchering RK , Lessler J , Shea K , Howerton E , Contamin L , Levander J , Salerno J , Hochheiser H , Kinsey M , Tallaksen K , Wilson S , Shin L , Rainwater-Lovett K , Lemairtre JC , DentHulse J , Kaminsky J , Lee EC , Perez-Saez J , Hill A , Karlen D , Chinazzi M , Davis JT , Mu K , Xiong X , Pastore YPionttiA , Vespignani A , Srivastava A , Porebski P , Venkatramanan S , Adiga A , Lewis B , Klahn B , Outten J , Orr M , Harrison G , Hurt B , Chen J , Vullikanti A , Marathe M , Hoops S , Bhattacharya P , Machi D , Chen S , Paul R , Janies D , Thill JC , Galanti M , Yamana TK , Pei S , Shaman JL , Healy JM , Slayton RB , Biggerstaff M , Johansson MA , Runge MC , Viboud C .
Elife 2022 11 type
Collaborative Hubs: Making the Most of Predictive Epidemic Modeling.
Reich NG , Lessler J , Funk S , Viboud C , Vespignani A , Tibshirani RJ , Shea K , Schienle M , Runge MC , Rosenfeld R , Ray EL , Niehus R , Johnson HC , Johansson MA , Hochheiser H , Gardner L , Bracher J , Borchering RK , Biggerstaff M .
Am J Public Health 2022 112 (6) e1-e4
Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States.
Cramer EY , Ray EL , Lopez VK , Bracher J , Brennen A , CastroRivadeneira AJ , Gerding A , Gneiting T , House KH , Huang Y , Jayawardena D , Kanji AH , Khandelwal A , Le K , Mhlemann A , Niemi J , Shah A , Stark A , Wang Y , Wattanachit N , Zorn MW , Gu Y , Jain S , Bannur N , Deva A , Kulkarni M , Merugu S , Raval A , Shingi S , Tiwari A , White J , Abernethy NF , Woody S , Dahan M , Fox S , Gaither K , Lachmann M , Meyers LA , Scott JG , Tec M , Srivastava A , George GE , Cegan JC , Dettwiller ID , England WP , Farthing MW , Hunter RH , Lafferty B , Linkov I , Mayo ML , Parno MD , Rowland MA , Trump BD , Zhang-James Y , Chen S , Faraone SV , Hess J , Morley CP , Salekin A , Wang D , Corsetti SM , Baer TM , Eisenberg MC , Falb K , Huang Y , Martin ET , McCauley E , Myers RL , Schwarz T , Sheldon D , Gibson GC , Yu R , Gao L , Ma Y , Wu D , Yan X , Jin X , Wang YX , Chen Y , Guo L , Zhao Y , Gu Q , Chen J , Wang L , Xu P , Zhang W , Zou D , Biegel H , Lega J , McConnell S , Nagraj VP , Guertin SL , Hulme-Lowe C , Turner SD , Shi Y , Ban X , Walraven R , Hong QJ , Kong S , vandeWalle A , Turtle JA , Ben-Nun M , Riley S , Riley P , Koyluoglu U , DesRoches D , Forli P , Hamory B , Kyriakides C , Leis H , Milliken J , Moloney M , Morgan J , Nirgudkar N , Ozcan G , Piwonka N , Ravi M , Schrader C , Shakhnovich E , Siegel D , Spatz R , Stiefeling C , Wilkinson B , Wong A , Cavany S , Espaa G , Moore S , Oidtman R , Perkins A , Kraus D , Kraus A , Gao Z , Bian J , Cao W , LavistaFerres J , Li C , Liu TY , Xie X , Zhang S , Zheng S , Vespignani A , Chinazzi M , Davis JT , Mu K , Pastore YPionttiA , Xiong X , Zheng A , Baek J , Farias V , Georgescu A , Levi R , Sinha D , Wilde J , Perakis G , Bennouna MA , Nze-Ndong D , Singhvi D , Spantidakis I , Thayaparan L , Tsiourvas A , Sarker A , Jadbabaie A , Shah D , DellaPenna N , Celi LA , Sundar S , Wolfinger R , Osthus D , Castro L , Fairchild G , Michaud I , Karlen D , Kinsey M , Mullany LC , Rainwater-Lovett K , Shin L , Tallaksen K , Wilson S , Lee EC , Dent J , Grantz KH , Hill AL , Kaminsky J , Kaminsky K , Keegan LT , Lauer SA , Lemaitre JC , Lessler J , Meredith HR , Perez-Saez J , Shah S , Smith CP , Truelove SA , Wills J , Marshall M , Gardner L , Nixon K , Burant JC , Wang L , Gao L , Gu Z , Kim M , Li X , Wang G , Wang Y , Yu S , Reiner RC , Barber R , Gakidou E , Hay SI , Lim S , Murray C , Pigott D , Gurung HL , Baccam P , Stage SA , Suchoski BT , Prakash BA , Adhikari B , Cui J , Rodrguez A , Tabassum A , Xie J , Keskinocak P , Asplund J , Baxter A , Oruc BE , Serban N , Arik SO , Dusenberry M , Epshteyn A , Kanal E , Le LT , Li CL , Pfister T , Sava D , Sinha R , Tsai T , Yoder N , Yoon J , Zhang L , Abbott S , Bosse NI , Funk S , Hellewell J , Meakin SR , Sherratt K , Zhou M , Kalantari R , Yamana TK , Pei S , Shaman J , Li ML , Bertsimas D , SkaliLami O , Soni S , TaziBouardi H , Ayer T , Adee M , Chhatwal J , Dalgic OO , Ladd MA , Linas BP , Mueller P , Xiao J , Wang Y , Wang Q , Xie S , Zeng D , Green A , Bien J , Brooks L , Hu AJ , Jahja M , McDonald D , Narasimhan B , Politsch C , Rajanala S , Rumack A , Simon N , Tibshirani RJ , Tibshirani R , Ventura V , Wasserman L , O'Dea EB , Drake JM , Pagano R , Tran QT , Ho LST , Huynh H , Walker JW , Slayton RB , Johansson MA , Biggerstaff M , Reich NG .
Proc Natl Acad Sci U S A 2022 119 (15) e2113561119 type
Reinfection with SARS-CoV-2 among previously infected healthcare personnel and first responders.
Akinbami LJ , Biggerstaff BJ , Petersen LR .
Clin Infect Dis 2021 75 (1) e201-e207 type
Recommended reporting items for epidemic forecasting and prediction research: The EPIFORGE 2020 guidelines.
Pollett S , Johansson MA , Reich NG , Brett-Major D , DelValle SY , Venkatramanan S , Lowe R , Porco T , Berry IM , Deshpande A , Kraemer MUG , Blazes DL , Pan-Ngum W , Vespigiani A , Mate SE , Silal SP , Kandula S , Sippy R , Quandelacy TM , Morgan JJ , Ball J , Morton LC , Althouse BM , Pavlin J , vanPanhuis W , Riley S , Biggerstaff M , Viboud C , Brady O , Rivers C .
PLoS Med 2021 18 (10) e1003793 type
Duration of Viral Nucleic Acid Shedding and Early Reinfection with the Severe Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Health Care Workers and First Responders.
Biggerstaff BJ , Akinbami LJ , Hales C , Chan PA , Petersen LR .
J Infect Dis 2021 224 (11) 1873-1877 type
Improving Pandemic Response: Employing Mathematical Modeling to Confront COVID-19.
Biggerstaff M , Slayton RB , Johansson MA , Butler JC .
Clin Infect Dis 2021 74 (5) 913-917 type
SARS-CoV-2 detection on self-collected saliva or anterior nasal specimens compared with healthcare personnel-collected nasopharyngeal specimens.
Marx GE , Biggerstaff BJ , Nawrocki CC , Totten SE , Travanty EA , Burakoff AW , Scott T , DeHey JC , Carlson JJ , Wendel KA , Harcourt JL , Tamin A , Thomas JD , Rowan SE .
Clin Infect Dis 2021 73 S65-S73 type
Isolate-dependent differences in clinical, pathological, and transcriptional profiles following in vitro and in vivo infections with Rickettsia rickettsii .
Galletti MFBM , Paddock CD , Hecht JA , Biggerstaff BJ , Ritter JM , Karpathy SE .
Infect Immun 2021 89 (4)
Reproductive incompatibility between Amblyomma maculatum (Acari: Ixodidae) group ticks from two disjunct geographical regions within the USA.
Allerdice MEJ , Snellgrove AN , Hecht JA , Hartzer K , Jones ES , Biggerstaff BJ , Ford SL , Karpathy SE , Delgado-delaMora J , Delgado-delaMora D , Licona-Enriquez JD , Goddard J , Levin ML , Paddock CD .
Exp Appl Acarol 2020 82 (4) 543-557
Evolving viral and serological stages of Zika virus RNA-positive blood donors and estimation of incidence of infection during the 2016 Puerto Rican Zika epidemic: an observational cohort study.
Williamson PC , Biggerstaff BJ , Simmons G , Stone M , Winkelman V , Latoni G , Alsina J , Bakkour S , Newman C , Pate LL , Galel SA , Kleinman S , Busch MP .
Lancet Infect Dis 2020 20 (12) 1437-1445
Reverse Transcription-Polymerase Chain Reaction Testing on Filter Paper-Dried Serum for Laboratory-Based Dengue Surveillance-American Samoa, 2018.
Curren EJ , Tufa AJ , Hancock WT , Biggerstaff BJ , Vaifanua-Leo JS , Montalbo CA , Sharp TM , Fischer M , Hills SL , Gould CV .
Am J Trop Med Hyg 2020 102 (3) 622-624
An open challenge to advance probabilistic forecasting for dengue epidemics.
Johansson MA , Apfeldorf KM , Dobson S , Devita J , Buczak AL , Baugher B , Moniz LJ , Bagley T , Babin SM , Guven E , Yamana TK , Shaman J , Moschou T , Lothian N , Lane A , Osborne G , Jiang G , Brooks LC , Farrow DC , Hyun S , Tibshirani RJ , Rosenfeld R , Lessler J , Reich NG , Cummings DAT , Lauer SA , Moore SM , Clapham HE , Lowe R , Bailey TC , Garcia-Diez M , Carvalho MS , Rodo X , Sardar T , Paul R , Ray EL , Sakrejda K , Brown AC , Meng X , Osoba O , Vardavas R , Manheim D , Moore M , Rao DM , Porco TC , Ackley S , Liu F , Worden L , Convertino M , Liu Y , Reddy A , Ortiz E , Rivero J , Brito H , Juarrero A , Johnson LR , Gramacy RB , Cohen JM , Mordecai EA , Murdock CC , Rohr JR , Ryan SJ , Stewart-Ibarra AM , Weikel DP , Jutla A , Khan R , Poultney M , Colwell RR , Rivera-Garcia B , Barker CM , Bell JE , Biggerstaff M , Swerdlow D , Mier YTeran-RomeroL , Forshey BM , Trtanj J , Asher J , Clay M , Margolis HS , Hebbeler AM , George D , Chretien JP .
Proc Natl Acad Sci U S A 2019 116 (48) 24268-24274
A systematic review and evaluation of Zika virus forecasting and prediction research during a public health emergency of international concern.
Kobres PY , Chretien JP , Johansson MA , Morgan JJ , Whung PY , Mukundan H , DelValle SY , Forshey BM , Quandelacy TM , Biggerstaff M , Viboud C , Pollett S .
PLoS Negl Trop Dis 2019 13 (10) e0007451
Technology to advance infectious disease forecasting for outbreak management.
George DB , Taylor W , Shaman J , Rivers C , Paul B , O'Toole T , Johansson MA , Hirschman L , Biggerstaff M , Asher J , Reich NG .
Nat Commun 2019 10 (1) 3932
Update: Influenza Activity in the United States During the 2017-18 Season and Composition of the 2018-19 Influenza Vaccine.
Garten R , Blanton L , Elal AIA , Alabi N , Barnes J , Biggerstaff M , Brammer L , Budd AP , Burns E , Cummings CN , Davis T , Garg S , Gubareva L , Jang Y , Kniss K , Kramer N , Lindstrom S , Mustaquim D , O'Halloran A , Sessions W , Taylor C , Xu X , Dugan VG , Fry AM , Wentworth DE , Katz J , Jernigan D .
MMWR Morb Mortal Wkly Rep 2018 67 (22) 634-642
Rapid colorimetric detection of Zika virus from serum and urine specimens by reverse transcription loop-mediated isothermal amplification (RT-LAMP).
Calvert Amanda E, Biggerstaff Brad J, Tanner Nathan A, Lauterbach Molly, Lanciotti Robert S. PloS one 2017 12(9) e0185340 .
PloS one 2017 12(9) e0185340
A simulation model to estimate the risk of transfusion-transmitted arboviral infection.
Shang Guifang, Biggerstaff Brad J, Richardson Alice M, Gahan Michelle E, Lidbury Brett A. Transfusion and apheresis science : official journal of the World Apheresis Association : official journal of the European Society for Haemapheresis 2016 Oct 55(2) 233-239 .
Transfusion and apheresis science : official journal of the World Apheresis Association : official journal of the European Society for Haemapheresis 2016 Oct 55(2) 233-239
Genotyping and Axenic Growth of Coxiella burnetii Isolates Found in the United States Environment.
Kersh Gilbert J, Priestley Rachael A, Hornstra Heidie M, Self Joshua S, Fitzpatrick Kelly A, Biggerstaff Brad J, Keim Paul, Pearson Talima, Massung Robert F.Vector borne and zoonotic diseases (Larchmont, N.Y.) 2016 Jun .
Vector borne and zoonotic diseases (Larchmont, N.Y.) 2016 Jun
Deletion of the NSm virulence gene of Rift Valley fever virus inhibits virus replication in and dissemination from the midgut of Aedes aegypti mosquitoes.
Kading Rebekah C, Crabtree Mary B, Bird Brian H, Nichol Stuart T, Erickson Bobbie Rae, Horiuchi Kalanthe, Biggerstaff Brad J, Miller Barry R. PLoS Negl Trop Dis 2014 Feb 8(2) e2670 .
PLoS Negl Trop Dis 2014 Feb 8(2) e2670
Infection and transmission of Rift Valley fever viruses lacking the NSs and/or NSm genes in mosquitoes: potential role for NSm in mosquito infection.
Crabtree Mary B, Kent Crockett Rebekah J, Bird Brian H, Nichol Stuart T, Erickson Bobbie Rae, Biggerstaff Brad J, Horiuchi Kalanthe, Miller Barry R. PLoS neglected tropical diseases 2012 6(5) e1639 .
PLoS neglected tropical diseases 2012 6(5) e1639
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