Advanced Molecular Detection Clips Content (Published on 12/21/2017)
U.S. announces new policy for pathogens that could cause a pandemic
Bernstein L. Washington Post, Dec 19, 2017.
Is man flu real? Study examines science behind mens complaints
Healio, Dec 12, 2017.
Improving regulation of microbiota transplants.
Hoffmann Diane et al. Science (New York, N.Y.) 2017 Dec (6369) 1390-1391
CONCEPTS / COMMENTS
Narrowing the spectrum: the new frontier of precision antimicrobials.
Paharik Alexandra E et al. Genome medicine 2017 Dec (1) 110
From public health genomics to precision public health: a 20-year journey.
Khoury Muin J et al. Genetics in medicine : official journal of the American College of Medical Genetics 2017 Dec
Public Health Research Resulting from One of the Worlds Largest Outbreaks Caused by Entero-Hemorrhagic Escherichia coli in Germany 2011: A Review
Kockerling E, et al. Front Public Health, Dec 11, 2017.
Advancing the Role of Neuroimmunity and Genetic Susceptibility in Gulf War Illness.
O'Callaghan James P et al. EBioMedicine 2017 Dec 11-12
METHODS / TOOLS
Next-generation sequencing applications in clinical bacteriology.
Motro Yair et al. Biomolecular detection and quantification 2017 Dec 1-6
MICRA: an automatic pipeline for fast characterization of microbial genomes from high-throughput sequencing data.
Caboche Ségolène et al. Genome biology 2017 Dec (1) 233
An Assessment of Different Genomic Approaches for Inferring Phylogeny of Listeria monocytogenes.
Henri Clémentine et al. Frontiers in microbiology 2017 2351
Higher recall in metagenomic sequence classification exploiting overlapping reads.
Girotto Samuele et al. BMC genomics 2017 Dec (Suppl 10) 917
Inference of genetic relatedness between viral quasispecies from sequencing data.
Glebova Olga et al. BMC genomics 2017 Dec (Suppl 10) 918
GHOST: global hepatitis outbreak and surveillance technology.
Longmire Atkinson G et al. BMC genomics 2017 Dec (Suppl 10) 916
Transmissibility of intra-host hepatitis C virus variants.
Campo David S et al. BMC genomics 2017 Dec (Suppl 10) 881
Identification of recent cases of hepatitis C virus infection using physical-chemical properties of hypervariable region 1 and a radial basis function neural network classifier.
Lara James et al. BMC genomics 2017 Dec (Suppl 10) 880
Novel ITS1 Fungal Primers for Characterization of the Mycobiome.
Usyk Mykhaylo et al. mSphere (6)
EVOLUTION / ECOLOGY / POPULATIONS
Zoonotic transfer of Clostridium difficile harboring antimicrobial resistance between farm animals and humans.
Knetsch C W et al. Journal of clinical microbiology 2017 Dec
No apparent transmission of livestock-associated methicillin-resistant Staphylococcus aureus CC398 in a survey of staff at a regional Danish hospital.
Würtz Else Toft et al. Antimicrobial resistance and infection control 2017 126
Molecular characterization of novel mosquito-borne Rickettsia spp. from mosquitoes collected at the Demilitarized Zone of the Republic of Korea.
Maina Alice N et al. PloS one 2017 (11) e0188327
Surveillance for and Discovery of Borrelia Species in US Patients Suspected of Tickborne Illness.
Kingry Luke C et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Jun (12) 1864-1871
Dengue viruses in Papua New Guinea: evidence of endemicity and phylogenetic variation, including the evolution of new genetic lineages.
Moore Peter R et al. Emerging microbes & infections 2017 Dec (12) e114
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
Antimicrobial susceptibility, virulence potential and sequence types associated with Arcobacter strains recovered from human faeces.
Pérez-Cataluña Alba et al. Journal of medical microbiology 2017 Dec (12) 1736-1743
Severe infections emerge from commensal bacteria by adaptive evolution.
Young Bernadette C et al. eLife 2017 Dec
Study of mcr-1 Gene-Mediated Colistin Resistance in Enterobacteriaceae Isolated from Humans and Animals in Different Countries.
Hadjadj Linda et al. Genes 2017 Dec (12)
High Prevalence of HIV Drug Resistance Among Newly Diagnosed Infants Aged <18 Months: Results From a Nationwide Surveillance in Nigeria.
Inzaule Seth C et al. Journal of acquired immune deficiency syndromes (1999) 2018 Jan (1) e1-e7
Drug resistance and treatment failure in leishmaniasis: A 21st century challenge.
Ponte-Sucre Alicia et al. PLoS neglected tropical diseases 2017 Dec (12) e0006052
DETECTION / DIAGNOSIS
Application of protein typing in molecular epidemiological investigation of nosocomial infection outbreak of aminoglycoside-resistant Pseudomonas aeruginosa.
Song Min et al. Environmental science and pollution research international 2017 Dec
Clinical utility of an optimised multiplex real-time PCR assay for the identification of pathogens causing sepsis in Vietnamese patients.
Ngo Tat Trung et al. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2017 Dec
Potential Diagnostic Power of Blood Circular RNA Expression in Active Pulmonary Tuberculosis.
Qian Zhongqing et al. EBioMedicine 2017 Dec
HCV deep-sequencing for sub-genotypes identification of mixed infections: a real life experience.
Del Campo José A et al. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2017 Dec
Molecular diagnosis of human microsporidian infections.
Heyworth Martin F et al. Transactions of the Royal Society of Tropical Medicine and Hygiene 2017 Dec
New insights into Trypanosoma cruzi evolution, genotyping and molecular diagnostics from satellite DNA sequence analysis.
Ramírez Juan C et al. PLoS neglected tropical diseases 2017 Dec (12) e0006139
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
Management and investigation of a Serratia marcescens outbreak in a neonatal unit in Switzerland - the role of hand hygiene and whole genome sequencing - R1, ARIC-D-17-00143.
Zingg Walter et al. Antimicrobial resistance and infection control 2017 125
Re-evaluation of a 2014 multi-country European outbreak of Salmonella Enteritidis phage type 14b using recent epidemiological and molecular data.
Hörmansdorfer Stefan et al. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2017 Dec (50)
Investigation of a cluster of multi-drug resistant tuberculosis in a high-rise apartment block in Singapore.
Ho Zheng Jie Marc et al. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2017 Dec
HIV antiretroviral resistance and transmission in mother-infant pairs enrolled in a large perinatal study
Yeganeh N, et al. Clin Infect Dis, Dec 19, 2017.
Molecular and Epidemiological Evidence of Patient-to-Patient Hepatitis C virus Transmission in a Scottish Emergency Department.
Johannessen I et al. The Journal of hospital infection 2017 Dec
Effect of population viral load on prospective HIV incidence in a hyperendemic rural African community.
Tanser Frank et al. Science translational medicine 2017 Dec (420)
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