Advanced Molecular Detection Clips Content (Published on 04/07/2016)
Rapid microbiology testing technology and the role of antimicrobial stewardship programs
Brock J. Infectious Disease News, Mar 2016.
Warren, Enzi Bill Seeks to Tighten Protections for Genetic Information in Research
Ray T. GenomeWeb, Apr 7, 2016.
NGS-Based Pipeline Used to Develop Improved Parasitic Worm MDx
Johnson M. GenomeWeb, Apr 6, 2016.
Microbes Meet Cancer
Yandell K. The Scientist, Apr 1, 2016.
EVENTS / TRAINING / WEB RESOURCES
Specialized database with unique search interface added to Zika virus resource page
(web resource) NCBI, Mar 31, 2016.
Emerging resistance, new antimicrobial agents…but no tests! The Challenge of Antimicrobial Susceptibility Testing in the Current U.S. Regulatory Landscape.
Humphries R M et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Mar
CONCEPTS / COMMENTS
The implications of whole-genome sequencing in the control of tuberculosis.
Lee Robyn S et al. Therapeutic advances in infectious disease 2016 Apr (2) 47-62
The Role of MicroRNA in Pathogenesis and as Markers of HCV Chronic Infection.
Lee Chang Ho et al. Current drug targets 2016 Apr
Host-directed therapies for infectious diseases: current status, recent progress, and future prospects.
Zumla Alimuddin et al. The Lancet. Infectious diseases 2016 Apr (4) e47-63
What Is Speciation?
Shapiro B Jesse et al. PLoS genetics 2016 Mar (3) e1005860
METHODS / TOOLS
Reconstructing transmission trees for communicable diseases using densely sampled genetic data.
Worby Colin J et al. The annals of applied statistics 2016 Mar (1) 395-417
The US Culture Collection Network lays the foundation for progress in preservation of valuable microbial resources.
McCluskey Kevin et al. Phytopathology 2016 Mar
EVOLUTION / ECOLOGY / POPULATIONS
Tracing isolates from domestic human Campylobacter jejuni infections to chicken slaughter batches and swimming water using whole-genome multilocus sequence typing.
Kovanen Sara et al. International journal of food microbiology 2016 Mar 53-60
Limited Dissemination of Extended-Spectrum β-Lactamase- and Plasmid-Encoded AmpC-Producing Escherichia coli from Food and Farm Animals, Sweden.
Börjesson Stefan et al. Emerging infectious diseases 2016 Apr (4) 634-40
The spread of hepatitis C virus genotype 1a in North America: a retrospective phylogenetic study.
Joy Jeffrey B et al. The Lancet. Infectious diseases 2016 Mar
Global genomic diversity of human papillomavirus type 11 (HPV11) based on 433 isolates and 78 complete genome sequences.
Jelen Mateja M et al. Journal of virology 2016 Mar
S1 gene-based phylogeny of infectious bronchitis virus: An attempt to harmonize virus classification.
Valastro Viviana et al. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2016 Apr 349-64
Complexity of Infection and Genetic Diversity in Cambodian Plasmodium vivax.
Friedrich Lindsey R et al. PLoS neglected tropical diseases 2016 Mar (3) e0004526
Population Structure in Naegleria fowleri as Revealed by Microsatellite Markers.
Coupat-Goutaland Bénédicte et al. PloS one 2016 (4) e0152434
Definitive Hosts of Versteria Tapeworms (Cestoda: Taeniidae) Causing Fatal Infection in North America.
Lee Laura M et al. Emerging infectious diseases 2016 Apr (4) 707-10
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
Emergence of a daptomycin-non-susceptible Enterococcus faecium strain that encodes mutations in DNA repair genes after high-dose daptomycin therapy.
Matono Takashi et al. BMC research notes 2016 (1) 197
Genome sequencing of a virulent avian Pasteurella multocida strain GX-Pm reveals the candidate genes involved in the pathogenesis.
Yu Chengjie et al. Research in veterinary science 2016 Apr 23-7
HUMAN TUBERCULOSIS II. M. tuberculosis mechanisms of genetic and phenotypic resistance to anti-tuberculosis drugs.
Sgaragli Giampietro et al. Current medicinal chemistry 2016 Apr
DETECTION / DIAGNOSIS
Recent and emerging innovations in Salmonella detection: a food and environmental perspective.
Bell Rebecca L et al. Microbial biotechnology 2016 Apr
Antibiotic Resistome: Improving Detection and Quantification Accuracy for Comparative Metagenomics.
Elbehery Ali H A et al. Omics : a journal of integrative biology 2016 Mar
Rapid Antimicrobial Susceptibility Testing of Bacillus anthracis, Yersinia pestis, and Burkholderia pseudomallei Using Laser Light Scattering Technology.
Bugrysheva Julia V et al. Journal of clinical microbiology 2016 Mar
Rapid investigation of cases and clusters of Legionnaires' Disease in England and Wales using direct molecular typing.
Mentasti Massimo et al. Journal of medical microbiology 2016 Apr
A pan-dengue virus reverse transcription-insulated isothermal polymerase chain reaction (RT-iiPCR) assay intended for point-of-need diagnosis of dengue infection using POCKITTM Nucleic Acid Analyzer.
Go Yun Young et al. Journal of clinical microbiology 2016 Mar
From synthetic DNA to PCR product: detection of fungal infections using SERS.
Mabbott Samuel et al. Faraday discussions 2016 Apr
Improved PCR-Based Detection of Soil Transmitted Helminth Infections Using a Next-Generation Sequencing Approach to Assay Design.
Pilotte Nils et al. PLoS neglected tropical diseases 2016 Mar (3) e0004578
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
Transmission of Middle East Respiratory Syndrome Coronavirus Infections in Healthcare Settings, Abu Dhabi.
Hunter Jennifer C et al. Emerging infectious diseases 2016 Apr (4) 647-56
Typing of Pneumocystis jirovecii by multilocus sequencing: evidence of outbreak?
Depypere M et al. European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology 2016 Apr
ANTIMICROBIALS / VACCINES / INTERVENTIONS
Fecal microbial transplants reduce antibiotic-resistant genes in patients with recurrent Clostridium difficile infection.
Millan Braden et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Mar
Autoimmune variant PTPN22 C1858T is associated with impaired responses to influenza virus vaccination.
Crabtree Juliet N et al. The Journal of infectious diseases 2016 Mar
A perfect storm: Impact of genomic variation and serial vaccination on low influenza vaccine effectiveness during the 2014-15 season.
Skowronski Danuta M et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Mar
Next-generation nanoantibacterial tools developed from peptides.
Vries Renko de et al. Nanomedicine (London, England) 2015 May (10) 1643-61
Expression Analysis Highlights AXL as a Candidate Zika Virus Entry Receptor in Neural Stem Cells.
Nowakowski Tomasz J et al. Cell stem cell 2016 Mar
HPV genotype distribution and anomalous association of HPV33 to cervical neoplastic lesions in San Luis Potosí, Mexico.
DelaRosa-Martínez Raúl et al. Infectious agents and cancer 2016 16
IL18 Gene Variants Influence the Susceptibility to Chagas Disease.
Leon Rodriguez Daniel A et al. PLoS neglected tropical diseases 2016 Mar (3) e0004583
Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by the CDC Office of Public Health Genomics to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.