Advanced Molecular Detection Clips Content (Published on 03/29/2018)
NEWS
-
Global antibiotic use rises, fueled by economic growth
Dall C. CIDRAP,Mar 26, 2018. -
Want to discover truly alien life? Pack a genome sequencer
Voosen P. Science, Mar 23, 2018. -
In world first, UK reports high-level gonorrhea resistance
Schnirring L. CIDRAP, Mar 298 2018. -
World leaders have the power to end TB. They must seize the moment
Goosby E, Kazatchkine M. STAT, Mar 27, 2018. -
Can We Gene-Edit Herpes Away?
Little B. Smithsonian, Mar 23, 2018. -
Antibiotics Increase Mouse Susceptibility to Dengue, West Nile, and Zika
Williams S. The Scientist, Mar 27, 2018. -
Malaria Cell Atlas Tracks Parasite Activity With Single-Cell Transcriptomes
GenomeWeb, Mar 27, 2018.
POLICY
-
CLSI Methods Development and Standardization Working Group Best Practices for Evaluation of Antimicrobial Susceptibility Tests.
Humphries Romney M et al. Journal of clinical microbiology 2018 Apr (4)
CONCEPTS / COMMENTS
-
Sequencing the enemy: the genomics of infectious diseases
Genomics Education Programme, NHS (UK), Mar 27, 2018. -
Population monitoring for drug-resistant tuberculosis: is genomics the answer?
Hill-Cawthorne Grant A et al. The Lancet. Infectious diseases 2018 Mar -
Precision medicine for drug-resistant tuberculosis in high-burden countries: is individualised treatment desirable and feasible?
Cox Helen et al. The Lancet. Infectious diseases 2018 Mar -
Breaking the code of antibiotic resistance.
Lo Stephanie W et al. Nature reviews. Microbiology 2018 Mar -
The Slow March toward Rapid Phenotypic Antimicrobial Susceptibility Testing: Are We There Yet?
Doern Christopher D et al. Journal of clinical microbiology 2018 Apr (4) -
Novel Vaccine Technologies: Essential Components of an Adequate Response to Emerging Viral Diseases.
Graham Barney S et al. JAMA 2018 Mar -
Towards Precision Medicine in Sepsis: a position paper from the European Society of Clinical Microbiology and Infectious Diseases.
Rello Jordi et al. Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2018 Mar -
Exploring Linkages between Taxonomic and Functional Profiles of the Human Microbiome
Langille MG. mSystems, Mar/Apr 2018.
METHODS / TOOLS
-
Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling.
Raju Sajan C et al. Journal of microbiological methods 2018 Mar 76-86 -
ESCMID Postgraduate Education Course Regional Capacity Building for Integration of Next-Generation Sequencing in the Clinical Microlab.
Motro Yair et al. Microbes and infection 2018 Mar -
Linking Associations of Rare Low-Abundance Species to Their Environments by Association Networks.
Karpinets Tatiana V et al. Frontiers in microbiology 2018 297 -
Wisconsin microbiome study, a cross-sectional investigation of dietary fibre, microbiome composition and antibiotic-resistant organisms: rationale and methods.
Eggers Shoshannah et al. BMJ open 2018 03 (3) e019450
EVOLUTION / ECOLOGY / POPULATIONS
-
Vancomycin-resistant Enterococcus faecium sequence type 796 - rapid international dissemination of a new epidemic clone.
Mahony Andrew A et al. Antimicrobial resistance and infection control 2018 44 -
Primordial origin and diversification of plasmids in Lyme disease agent bacteria.
Casjens Sherwood R et al. BMC genomics 2018 03 (1) 218 -
Molecularly barcoded Zika virus libraries to probe in vivo evolutionary dynamics.
Aliota Matthew T et al. PLoS pathogens 2018 Mar (3) e1006964 -
Identification of Novel Viruses in Amblyomma americanum , Dermacentor variabilis , and Ixodes scapularis Ticks.
Tokarz Rafal et al. mSphere (2) -
Whole genome sequence phylogenetic analysis of four Mexican rabies viruses isolated from cattle.
Bárcenas-Reyes I et al. Research in veterinary science 2017 Aug 21-24 -
Rotavirus Surveillance in Pakistan During 2015-2016 Reveals High Prevalence of G12P[6].
Umair Massab et al. Journal of medical virology 2018 Mar
-
New threats of H7N9 influenza virus: the spread and evolution of highly and low pathogenic variants with high genomic diversity in Wave Five.
Quan Chuansong et al. Journal of virology 2018 Mar -
Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals.
Böhme Ulrike et al. Genome research 2018 Mar -
Maternal invasion history of Aedes aegypti and Aedes albopictus into the Isthmus of Panama: Implications for the control of emergent viral disease agents.
Eskildsen Gilberto A et al. PloS one 2018 (3) e0194874
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
-
In vivo evolution of resistant subpopulations of KPC-producing Klebsiella pneumoniae during ceftazidime/avibactam treatment.
Gaibani Paolo et al. The Journal of antimicrobial chemotherapy 2018 Mar -
HIV-1 drug resistance before initiation or re-initiation of first-line antiretroviral therapy in low-income and middle-income countries: a systematic review and meta-regression analysis.
Gupta Ravindra K et al. The Lancet. Infectious diseases 2018 Mar (3) 346-355
DETECTION / DIAGNOSIS
-
Clinical and economic impact of the introduction of a nucleic acid amplification assay for Clostridium difficile.
Guinta Margaret M et al. Annals of clinical microbiology and antimicrobials 2017 Dec (1) 77
-
Preliminary Incidence and Trends of Infections with Pathogens Transmitted Commonly Through Food - Foodborne Diseases Active Surveillance Network, 10 U.S. Sites, 2006-2017.
Marder Mph Ellyn P et al. MMWR. Morbidity and mortality weekly report 2018 Mar (11) 324-328
-
Exploitation of microbial forensics and nanotechnology for the monitoring of emerging pathogens.
Bokhari Habib et al. Critical reviews in microbiology 2018 Mar 1-18 -
Detection of "Xisco" gene for identification of Streptococcus pneumoniae isolates.
Salvà-Serra Francisco et al. Diagnostic microbiology and infectious disease 2018 Apr (4) 248-250 -
Use of the mtrR Gene for Rapid Molecular Diagnosis of Neisseria gonorrhoeae and Identification of the Reduction of Susceptibility to Antibiotics in Endocervical Swabs.
Escobedo-Guerra Marcos R et al. Molecular diagnosis & therapy 2018 Mar -
A case of severe soft tissue infection due to Streptococcus tigurinus diagnosed by necropsy in which genomic analysis was useful for clarifying its pathogenicity.
Yoshizawa Hidenori et al. Pathology international 2018 Mar -
Typing of vancomycin-resistant enterococci with MALDI-TOF mass spectrometry in a nosocomial outbreak setting.
Holzknecht Barbara J et al. Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2018 Mar -
Genetic sequencing for surveillance of drug resistance in tuberculosis in highly endemic countries: a multi-country population-based surveillance study.
Zignol Matteo et al. The Lancet. Infectious diseases 2018 Mar -
Tuberculosis: advances and challenges in development of new diagnostics and biomarkers.
Walzl Gerhard et al. The Lancet. Infectious diseases 2018 Mar -
Species Identification and Delineation of Pathogenic Mucorales by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.
Shao Jin et al. Journal of clinical microbiology 2018 Apr (4) -
First case of human infection with Plasmodium knowlesi in Laos.
Iwagami Moritoshi et al. PLoS neglected tropical diseases 2018 Mar (3) e0006244 -
Malaria diagnosis by PCR revealed differential distribution of mono and mixed species infections by Plasmodium falciparum and P. vivax in India.
Siwal Nisha et al. PloS one 2018 (3) e0193046 -
DNA detection of Trypanosoma evansi: Diagnostic validity of a new assay based on loop-mediated isothermal amplification (LAMP).
Tong Qunbo et al. Veterinary parasitology 2018 Jan 1-6
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
-
Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit.
Dickinson Harriet et al. The Journal of hospital infection 2018 Mar
-
Comparative analysis of core genome MLST and SNP typing within a European Salmonella serovar Enteritidis outbreak.
Pearce Madison E et al. International journal of food microbiology 2018 Feb 1-11 -
Whole-genome sequencing revealed concurrent outbreaks of shigellosis in the English Orthodox Jewish Community caused by multiple importations of Shigella sonnei from Israel.
Rew Vanessa et al. Microbial genomics 2018 Mar -
Transmission of HIV-1 drug resistance mutations within partner-pairs: A cross-sectional study of a primary HIV infection cohort.
Stekler Joanne D et al. PLoS medicine 2018 Mar (3) e1002537 -
Field investigation with real-time virus genetic characterisation support of a cluster of Ebola virus disease cases in Dubréka, Guinea, April to June 2015.
Pini Alessandro et al. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2018 Mar (12) -
An Outbreak of Microsporum canis infection at a military base associated with stray cat exposure and person-to-person transmission.
Brosh-Nissimov Tal et al. Mycoses 2018 Mar
HOST-MICROBE INTERACTIONS
-
Neonates with congenital Cytomegalovirus and hearing loss identified via the universal newborn hearing screening program.
Rawlinson William D et al. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2018 Mar 110-115
-
Association between single nucleotide polymorphisms in TLR4, TLR2, TLR9, VDR, NOS2 and CCL5 genes with acute viral bronchiolitis.
Alvarez Alfonso Eduardo et al. Gene 2018 Mar 7-17 -
Role of genetic heterogeneity in determining the epidemiological severity of H1N1 influenza.
Sambaturu Narmada et al. PLoS computational biology 2018 Mar (3) e1006069 -
Selective maternal seeding and environment shape the human gut microbiome.
Korpela Katri et al. Genome research 2018 Mar
indicates that at least one CDC-affiliated author; indicates that the article addresses aspects of implementation or evaluation in clinical or public health practice. Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by the CDC Office of Genomics and Precision Public Health to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2023
- Page last updated:Sep 21, 2023
- Content source: