Advanced Molecular Detection Clips Content (Published on 02/29/2024)
NEWS
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Drug-resistant microbes: ‘brain drain’ is derailing the fight to stop them
Tozer L. Nature, Feb 21, 2024. -
A Doctor’s Lifelong Quest to Solve One of Pediatric Medicine’s Greatest Mysteries
Baumgartner E. New York Times, Feb 27, 2024. -
CARB-X announces funding for gonorrhea vaccine
Soucheray S. CIDRAP, Feb 27, 2024. -
New large study indicates vaccines protective against long COVID
Soucheray S. CIDRAP, Feb 27, 2024. -
Avian flu reaches Antarctica's mainland
Schnirring L. CIDRAP, Feb 26, 2024. -
Plants can take up CWD-causing prions from soil in the lab. What happens if they are eaten?
Van Beusekom M. CIDRAP, Feb 22, 2024.
CONCEPTS / COMMENTS
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The next chapter for Africa's genomic initiatives.
Paul Adepoju et al. Lancet Infect Dis 2024 2 (3) e160 -
Solving the puzzle of Long Covid.
Ziyad Al-Aly et al. Science 2024 2 (6685) 830-832 -
Vector-borne pathogen surveillance in a metagenomic world.
Koray Ergunay et al. PLoS Negl Trop Dis 2024 2 (2) e0011943 -
The End of B/Yamagata Influenza Transmission - Transitioning from Quadrivalent Vaccines.
Arnold S Monto et al. N Engl J Med 2024 2
METHODS / TOOLS
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Hound: a novel tool for automated mapping of genotype to phenotype in bacterial genomes assembled de novo.
Carlos Reding et al. Brief Bioinform 2024 2 (2) -
Utilizing cost-effective portable equipment to enhance COVID-19 variant tracking both on-site and at a large scale.
Sung Yong Park et al. J Clin Microbiol 2024 2 e0155823 -
Monitoring avian influenza in mammals with real-time data.
Francesco Branda et al. Pathog Glob Health 2024 2 1-5 -
On the limits of 16S rRNA gene-based metagenome prediction and functional profiling.
Monica Steffi Matchado et al. Microb Genom 2024 2 (2)
EVOLUTION / ECOLOGY / POPULATIONS
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Newly Identified Mycobacterium africanum Lineage 10, Central Africa.
Christophe Guyeux et al. Emerg Infect Dis 2024 2 (3) 560-563 -
The Spatiotemporal Distribution and Molecular Characterization of Circulating Dengue Virus Serotypes/Genotypes in Senegal from 2019 to 2023.
Idrissa Dieng et al. Trop Med Infect Dis 2024 2 (2) -
Phylodynamic evolution of HIV-1 A6 sub-subtype epidemics in Poland.
Karol Serwin et al. J Med Virol 2024 2 (2) e29482 -
HIV Immunocapture Reveals Particles Expressed in Semen under INSTI-based Therapy are Largely Myeloid Cell-Derived and Disparate from Circulating Provirus.
Jeffrey A Johnson et al. J Infect Dis 2024 2
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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One Health surveillance of colistin-resistant Enterobacterales in Belgium and the Netherlands between 2017 and 2019.
Sien De Koster et al. PLoS One 2024 2 (2) e0298096 -
Exploring the genetic basis of natural resistance to microcins.
Soufiane Telhig et al. Microb Genom 2024 2 (2) -
Identification of a novel CG307 sub-clade in third-generation-cephalosporin-resistant Klebsiella pneumoniae causing invasive infections in the USA.
Selvalakshmi Selvaraj Anand et al. Microb Genom 2024 2 (2) -
Comprehensive Analysis of HIV-1 Integrase Resistance-Related Mutations in African Countries.
Francesco Branda et al. Pathogens 2024 2 (2) -
Etiological agent and clinical characteristics of haemorrhagic fever with renal syndrome in the southern Republic of Korea: A genomic surveillance study.
Sara P Prayitno et al. Clin Microbiol Infect 2024 2
DETECTION / DIAGNOSIS
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Optimal environmental testing frequency for outbreak surveillance.
Jason W Olejarz et al. Epidemics 2024 2 100750 -
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131.
Gisele Peirano et al. J Clin Microbiol 2024 2 e0168723 -
Borrelia miyamotoi BipA-like protein, BipM, is a candidate serodiagnostic antigen distinguishing between Lyme disease and relapsing fever Borrelia infections.
Kevin S Brandt et al. Ticks Tick Borne Dis 2024 2 (3) 102324 -
Old tools, new applications: Use of environmental bacteriophages for typhoid surveillance and evaluating vaccine impact.
Yogesh Hooda et al. PLoS Negl Trop Dis 2024 2 (2) e0011822 -
Genomic Surveillance of SARS-CoV-2: Data Analysis and Assessment of Tunisian Strategy from January 2021 to February 2022.
Arwa Neffati et al. Epidemiologia (Basel) 2024 2 (1) 80-89 -
Dispersion patterns of SARS-CoV-2 variants Gamma, Lambda and Mu in Latin America and the Caribbean.
Tiago Gräf et al. Nat Commun 2024 2 (1) 1837 -
Near-source passive sampling for monitoring viral outbreaks within a university residential setting.
Kata Farkas et al. Epidemiol Infect 2024 2 e31 -
HIV-1 Drug Resistance Detected by Next-Generation Sequencing among ART-Naïve Individuals: A Systematic Review and Meta-Analysis.
Fei Ouyang et al. Viruses 2024 2 (2) -
Robust and sensitive amplicon-based whole-genome sequencing assay of respiratory syncytial virus subtype A and B.
Tiina Talts et al. Microbiol Spectr 2024 2 e0306723 -
A robust, scalable, and cost-efficient approach to whole genome sequencing of RSV directly from clinical samples.
Sophie Köndgen et al. J Clin Microbiol 2024 2 e0111123
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Transmission dynamics and phylogeography of Mycobacterium tuberculosis in China based on whole-genome phylogenetic analysis.
Yi-Fan Li et al. Int J Infect Dis 2023 10 124-131 -
Prolonged bacterial carriage and hospital transmission detected by whole genome sequencing surveillance.
Alexander J Sundermann et al. Antimicrob Steward Healthc Epidemiol 2024 2 (1) e11 -
Molecular Epidemiology of Underreported Emerging Zoonotic Pathogen Streptococcus suis in Europe.
Jaime Brizuela et al. Emerg Infect Dis 2024 2 (3) 413-422 -
Trends and Spatiotemporal Patterns of Avian Influenza Outbreaks in Italy: A Data-Driven Approach.
Francesco Branda et al. Infect Dis Rep 2024 2 (1) 1-12
ANTIMICROBIALS / VACCINES / INTERVENTIONS
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Adverse Events After XBB.1.5-Containing COVID-19 mRNA Vaccines.
Niklas Worm Andersson et al. JAMA 2024 2
HOST-MICROBE INTERACTIONS
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Discovering the link between IL12RB1 gene polymorphisms and tuberculosis susceptibility: a comprehensive meta-analysis.
Jie Huang et al. Front Public Health 2024 2 1249880 -
Nasopharyngeal angiotensin converting enzyme 2 (ACE2) expression as a risk-factor for SARS-CoV-2 transmission in concurrent hospital associated outbreaks.
Aidan M Nikiforuk et al. BMC Infect Dis 2024 2 (1) 262 -
The intestinal microbiome of inflammatory bowel disease across the pediatric age range.
Máire A Conrad et al. Gut Microbes 2024 2 (1) 2317932 -
 Early-life stress and the gut microbiome: A comprehensive population-based investigation.
Rosa H Mulder et al. Brain Behav Immun 2024 2
Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Jan 9, 2025