This Week's Advanced Molecular Detection Clips
Uganda launches Ebola Sudan vaccine trial; sequencing shows no link to 2022 outbreak
Schnirring L. CIDRAP, Feb 3, 2025.
GAO: Public-health workforce shortage undermines ability to respond to outbreaks, other emergencies
Van Beusekom M. CIDRAP, Jan 31, 2025.
Mpox outbreak in DR Congo, neighboring countries underscores threat of clade 1b
Soucheray S. CIDRAP, Jan 30, 2025.
Will bird flu spark a human pandemic? Scientists say the risk is rising
Kozlov M. Nature, Jan 30, 2025.
Scientists May Have Found Traces of an Extinct Genetic Code That Came Before DNA
Stolte D. SciTech Daily, Feb 2, 2025.
USDA milk testing shows different strain of H5N1 bird flu in Nevada dairy herds
Branswell H. STAT, Feb 5, 2025.
Microbiome science needs more microbiologists.
Lauren C Radlinski et al. Nat Microbiol 2025 1 (2) 263-264
Explainable artificial intelligence evolves antimicrobial peptides.
Jeremie Alexander et al. Nat Microbiol 2025 1 (2) 267-269
Scarcity of research on breastfeeding and Ebola diseases is placing the lives of women and infants at risk: a call to specific action.
Catriona Waitt et al. Lancet Glob Health 2025 1 (2) e364-e371
A Framework for Assessing Viral Pathogens: A Key Element of the BARDA Emerging Infectious Diseases Strategy.
Richard C White et al. Health Secur 2025 1
Laboratory capacity-building during COVID-19 in Somalia: improving access to essential diagnostics for national health security in a fragile setting.
Salvador Figuereo et al. J Epidemiol Glob Health 2025 2 (1) 18
Comparison of Illumina and Oxford Nanopore sequencing data quality for Clostridioides difficile genome analysis and their application for epidemiological surveillance.
Semeh Bejaoui et al. BMC Genomics 2025 1 (1) 92
Improving Nanopore sequencing-based core genome MLST for global infection control: a strategy for GC-rich pathogens like Burkholderia pseudomallei.
Sarah Weigl et al. J Clin Microbiol 2025 2 e0156924
Harnessing Non-standard Nucleic Acids for Highly Sensitive Icosaplex (20-Plex) Detection of Microbial Threats for Environmental Surveillance.
Hinako Kawabe et al. ACS Synth Biol 2025 2
Meta-analyses of Culex blood-meals indicates strong regional effect on feeding patterns.
Jet S Griep et al. PLoS Negl Trop Dis 2025 1 (1) e0012245
Progression of antibiotic resistance in Neisseria meningitidis.
Emilio Rodriguez et al. Clin Microbiol Rev 2025 1 e0021524
Short-term evolution and dispersal patterns of fluconazole-resistance in Candida auris clade III.
Irving Cancino-Muñoz et al. mBio 2024 12 (2) e0316424
Assessment of different genotyping markers and algorithms for distinguishing Plasmodium falciparum recrudescence from reinfection in Uganda.
Alex Mwesigwa et al. Sci Rep 2025 2 (1) 4375
One-Step Multiplex Polymerase Chain Reaction Assay for the Detection of Major Disease-Transmitting Mosquito Vectors in India.
Mintu Karan et al. Am J Trop Med Hyg 2024 11 (2) 296-303
Development and evaluation of a next-generation sequencing methodology for measles virus using Oxford Nanopore Technology.
Vanessa Zubach et al. J Clin Microbiol 2025 2 e0145624
Comprehensive genomic surveillance reveals transmission profiles of extensively drug-resistant tuberculosis cases in Pará, Brazil.
Davi Josué Marcon et al. Front Microbiol 2025 2 1514862
Consistency between metagenomic next-generation sequencing versus traditional microbiological tests for infective disease: systemic review and meta-analysis.
Chengxi Liu et al. Crit Care 2025 2 (1) 55
Severe Non-Donor-Derived Lymphocytic Choriomeningitis Virus Infection in 2 Solid Organ Transplant Recipients.
Leanna E Sayyad et al. Open Forum Infect Dis 2025 2 (2) ofaf002
Health Department: Arizona | Illinois | New Mexico
Transmission patterns of hepatitis E virus.
Jil A Haase et al. Curr Opin Virol 2025 2 101451
Metabarcoding captures genetic diversity and links cases in outbreaks of cryptosporidiosis in New Zealand.
Paul Ogbuigwe et al. J Infect 2025 1 106427
Segmentation of the response of a neuronal network into clusters with similar activity.
P Parodi et al. Biosystems 1999 1 (1-3) 171-8
Differential protection against SARS-CoV-2 reinfection pre- and post-Omicron
Chemaitelly H, et al. Nature, Feb 5, 2025.
Targets of influenza human T-cell response are mostly conserved in H5N1.
John Sidney et al. mBio 2024 12 (2) e0347924
Content Index for this Week's AMD Clips
This Week's CDC Authored Publications
Top 5 Most Altmetric Scores
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The proximal origin of SARS-CoV-2.
Andersen Kristian G et al. Nature medicine 2020 04 (4) 450-452 |
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Safety and Efficacy of the BNT162b2 mRNA Covid-19 Vaccine.
Polack Fernando P et al. The New England journal of medicine 2020 Dec |
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Outbreak of SARS-CoV-2 Infections, Including COVID-19 Vaccine Breakthrough Infections, Associated with Large Public Gatherings - Barnstable County, Massachusetts, July 2021.
Brown Catherine M et al. MMWR. Morbidity and mortality weekly report 2021 8 (31) 1059-1062
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Myocarditis Cases Reported After mRNA-Based COVID-19 Vaccination in the US From December 2020 to August 2021.
Oster Matthew E et al. JAMA 2022 1 (4) 331-340
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A SARS-like cluster of circulating bat coronaviruses shows potential for human emergence.
Menachery Vineet D et al. Nature medicine 2015 Nov |
About
This database includes published scientific literature, popular press articles, tools, and databases on the emerging role of pathogen genomics and host-pathogen interactions in infectious disease control and prevention. It includes information on methods, evolution and pathogenicity, detection and diagnosis, outbreaks, epidemiology and transmission, antimicrobials, and vaccines and host-pathogen interactions. The database contains items from all previous editions of Advanced Molecular Detection Clips, as well as from the current edition. Clips are selected weekly from a variety of sources, including PubMed, journal tables of contents, and online media. View Data Selection Criteria.
Note:
- indicates at least one CDC-affiliated author.
- indicates that the article addresses aspects of implementation or evaluation in clinical or public health practice.
- Health Department: identifies articles having authors affiliated with U.S. public health departments, either at the indicated state or its sub-jurisdictions (city, county); health departments in U.S. territories are labeled Other.
- Page last reviewed:Feb 1, 2024