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Pathogen Genomics and Health Database|Home|PHGKB

Pathogen Advanced Molecular Detection Database


Last data update: Sep 17, 2020. (Total: 15768 Documents since 2015)
       dataset       CDC Author Only

This Week's New Publications

Biological Collections: Ensuring Critical Research and Education for the 21st Century
(report) NASEM, Sep 2020.
MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets.
Choi Meena et al. Nature methods 2020 Sep
Fast coronavirus tests: what they can and can't do
Guglielmi G. Nature, Sep 16, 2020.
FDA Publishes First Batch of SARS-CoV-2 MDx Limit of Detection Comparison Results
Johnson M. GenomeWeb, Sep 16, 2020.
New York City Opening Dedicated COVID-19 Testing Laboratory
GenomeWeb, Sep 17, 2020.
Full Molecular Typing of Neisseria meningitidis Directly from Clinical Specimens for Outbreak Investigation
Itsko M, et al. J Clin Microbiol, Sep 16, 2020. Brand
Landscape of Emerging Infectious Disease Research and Development: Preventing the Next Pandemic
(link to report) Policy Cures Research (Australia), Sep 17, 2020.
Real-time gene sequencing can help control - and may someday prevent - pandemics
Quick J. STAT, Sep 11, 2020.
Array programming with NumPy
Harris CR, et al. Nature, Sep 16, 2020.
Levels of genetic diversity of SARS-CoV-2 virus: reducing speculations about the genetic variability of the virus in South America
Filho CB, et al. bioRxiv, Sep 15, 2020.
COVID-19 and the Path to Immunity.
Stephens David S et al. JAMA 2020 Sep
Investigating Whether Blood Type Is Linked to COVID-19 Risk
Rubin R. JAMA, Sep 16, 2020.
Genome Data Help to Track COVID-19 Superspreading Event
(blog post) Collins F. NIH Director's Blog, Sep 8, 2020.
Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing.
Joung Julia et al. The New England journal of medicine 2020 Sep
SARS-CoV-2 in Quarantined Domestic Cats from COVID-19 Households or Close Contacts, Hong Kong, China
Barrs VR, et al. Emerg Infect Dis, Sep 16, 2020.
Genome sequencing of sewage detects regionally prevalent SARS-CoV-2 variants
Crit-Christoph A, et al. medRxiv, Sep 14, 2020.
Pooled Testing for Surveillance of SARS-CoV-2 in Asymptomatic Individuals.
Das Sanchita et al. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2020 Sep 104619
Genomic Prediction of Antimicrobial Resistance: Ready or Not, Here It Comes!
Ransom Eric M et al. Clinical chemistry 2020 Sep

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This Week's CDC Authored Publications

Full Molecular Typing of Neisseria meningitidis Directly from Clinical Specimens for Outbreak Investigation External Web Site Icon
Itsko M, et al. J Clin Microbiol, Sep 16, 2020. Brand
High levels of HIV drug resistance among adults failing second-line antiretroviral therapy in Namibia. External Web Site Icon
Jordan Michael R et al. Medicine 2020 Sep (37) e21661 Brand Brand
Cryptic transmission of SARS-CoV-2 in Washington state. External Web Site Icon
Bedford Trevor et al. Science (New York, N.Y.) 2020 Sep Brand

Top 5 Most Viewed

The Oldest Virus Ever Sequenced Comes From a 7,000-Year-Old Tooth
Zhang S. Atlantic, May 9, 2018.
(657 reads)
Can Viruses in the Genome Cause Disease?
Zimmer K. The Scientist, Jan 1, 2019.
(645 reads)
Amblyomma americanum (Acari: Ixodidae) Ticks Are Not Vectors of the Lyme Disease Agent, Borrelia burgdorferi (Spirocheatales: Spirochaetaceae): A Review of the Evidence.
Stromdahl Ellen Y et al. Journal of medical entomology 2018 05 (3) 501-514 Brand Brand

(539 reads)
Using the Plasmodium mitochondrial genome for classifying mixed-species infections and inferring the geographical origin of P. falciparum parasites imported to the U.S.
Schmedes Sarah E et al. PloS one 2019 (4) e0215754 Brand

(466 reads)
The Recurring Dread of a Paralyzing Illness
Yong E. Atlantic, Dec 10, 2018.
(462 reads)

About

This database includes published scientific literature, popular press articles, tools, and databases on the emerging role of pathogen genomics and host-pathogen interactions in infectious disease control and prevention. It includes information on methods, evolution and pathogenicity, detection and diagnosis, outbreaks, epidemiology and transmission, antimicrobials, and vaccines and host-pathogen interactions. The database contains items from all previous weekly editions of Advanced Molecular Detection Clips, as well as from the current edition. Clips are selected weekly from a variety of sources, including PubMed, journal tables of contents, and online media. View Data Selection Criteria. See the current edition.

Content Statistics

  • Total Publications: 15768
  • Total CDC-Authored Publications: 1429
  • Total Categories: 9
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